RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 CHRNA1P02708 482 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 SLC17A1Q14916 467 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 IL17RCQ8NAC3 791 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 PHOSPHO1Q8TCT1 267 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 HOXB13Q92826 284 aaPredicted RBP12.78□□□□□ -0.36
PRDM16-201ENST00000270722 DNAJB9Q9UBS3 223 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 UTS2RQ9UKP6 389 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 A8MXE2 369 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 BHMG1C9JSJ3 638 aaPredicted RBP12.78□□□□□ -0.36
PRDM16-201ENST00000270722 P04436 131 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 CYP11A1P05108 521 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 GALTP07902 379 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 DBPQ10586 325 aaPredicted RBP12.78□□□□□ -0.36
PRDM16-201ENST00000270722 KCT2Q8NC54 265 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 COPS5Q92905 334 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 POTEKPQ9BYX7 375 aa12.78□□□□□ -0.36
PRDM16-201ENST00000270722 CLCNKBP51801 687 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 EIF2B1Q14232 305 aaKnown RBP12.77□□□□□ -0.36
PRDM16-201ENST00000270722 EIF4HQ15056 248 aaKnown RBP12.77□□□□□ -0.36
PRDM16-201ENST00000270722 PEA15Q15121 130 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 PAN3Q58A45 887 aaKnown RBP12.77□□□□□ -0.36
PRDM16-201ENST00000270722 OR52J3Q8NH60 311 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 LRRC58Q96CX6 371 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 PCED1BQ96HM7 432 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 UBXN10Q96LJ8 280 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 MRPL45Q9BRJ2 306 aaKnown RBP12.77□□□□□ -0.36
PRDM16-201ENST00000270722 LYRM2Q9NU23 88 aaPredicted RBP12.77□□□□□ -0.36
PRDM16-201ENST00000270722 PTTG3PQ9NZH4 202 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 SCML1Q9UN30 329 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 PHYHO14832 338 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 CDK1P06493 297 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 STT3AP46977 705 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 CREG2Q8IUH2 290 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 OR10Q1Q8NGQ4 319 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 MROQ9BYG7 248 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 SFXN1Q9H9B4 322 aa12.77□□□□□ -0.36
PRDM16-201ENST00000270722 FAM120CQ9NX05 1096 aaKnown RBP12.77□□□□□ -0.36
PRDM16-201ENST00000270722 LOC102723532A0A0G2JNH3 316 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 PTBP3O95758 552 aaKnown RBP12.77□□□□□ -0.37
PRDM16-201ENST00000270722 RHOP08100 348 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 CCNOP22674 350 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 SCARB2Q14108 478 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 SLBPQ14493 270 aaKnown RBP eCLIP12.77□□□□□ -0.37
PRDM16-201ENST00000270722 GPR68Q15743 365 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 TMEM41AQ96HV5 264 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 ZNF641Q96N77 438 aaPredicted RBP12.77□□□□□ -0.37
PRDM16-201ENST00000270722 ABRACLQ9P1F3 81 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 LRFN1Q9P244 771 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 SULT1C4O75897 302 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 PAX6P26367 422 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 LCTLQ6UWM7 567 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 ERN2Q76MJ5 926 aaKnown RBP12.77□□□□□ -0.37
PRDM16-201ENST00000270722 MVB12BQ9H7P6 319 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 PCDHB14Q9Y5E9 798 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 A0A0G2JN53 185 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 ENSAO43768 121 aaKnown RBP12.77□□□□□ -0.37
PRDM16-201ENST00000270722 RFPL3O75679 317 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 ADRB2P07550 413 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 CHRNB2P17787 502 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 AZGP1P25311 298 aaKnown RBP12.77□□□□□ -0.37
PRDM16-201ENST00000270722 PMM1Q92871 262 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 C11orf16Q9NQ32 467 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 NIT2Q9NQR4 276 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 RALYQ9UKM9 306 aaKnown RBP12.77□□□□□ -0.37
PRDM16-201ENST00000270722 JUPP14923 745 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 RPL7AP62424 266 aaKnown RBP12.77□□□□□ -0.37
PRDM16-201ENST00000270722 ABHD17BQ5VST6 288 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 TRABD2AQ86V40 505 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 GPR152Q8TDT2 470 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 LMX1AQ8TE12 382 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 MITD1Q8WV92 249 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 MTERF1Q99551 399 aaKnown RBP12.77□□□□□ -0.37
PRDM16-201ENST00000270722 SLC35A5Q9BS91 424 aa12.77□□□□□ -0.37
PRDM16-201ENST00000270722 VSX1Q9NZR4 365 aaPredicted RBP12.77□□□□□ -0.37
PRDM16-201ENST00000270722 A6NLC8 198 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 GPR89AB7ZAQ6 455 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 SLC19A2O60779 497 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 ADAMTS4O75173 837 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 GPR89BP0CG08 455 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 ZNF16P17020 682 aaPredicted RBP12.76□□□□□ -0.37
PRDM16-201ENST00000270722 RUNX2Q13950 521 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 ZNF630Q2M218 657 aaPredicted RBP12.76□□□□□ -0.37
PRDM16-201ENST00000270722 TANGO2Q6ICL3 276 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 IFI44Q8TCB0 444 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 KIAA1191Q96A73 305 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 ACSL6Q9UKU0 697 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 ANKRD34BA5PLL1 514 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 MAOBP27338 520 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 CDK3Q00526 305 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 SLC22A25Q6T423 547 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 OR5K1Q8NHB7 308 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 SHKBP1Q8TBC3 707 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 SGK3Q96BR1 496 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 C12orf57Q99622 126 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 DCSTAMPQ9H295 470 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 OR51B5Q9H339 312 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 ST14Q9Y5Y6 855 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 VSTM2BA6NLU5 285 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 RNF13O43567 381 aa12.76□□□□□ -0.37
PRDM16-201ENST00000270722 GKN3PP0CG01 181 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms