RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 DBX2Q6ZNG2 339 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 SAMD14Q8IZD0 417 aaPredicted RBP14.52□□□□□ -0.08
COPS3-201ENST00000268717 CARFQ8N187 725 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 C19orf47Q8N9M1 422 aaKnown RBP14.52□□□□□ -0.08
COPS3-201ENST00000268717 KCT2Q8NC54 265 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 FCRL4Q96PJ5 515 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 TRAPPC9Q96Q05 1148 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 SLC38A3Q99624 504 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 MACROD1Q9BQ69 325 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 DPH2Q9BQC3 489 aaPredicted RBP14.52□□□□□ -0.08
COPS3-201ENST00000268717 CXorf36Q9H7Y0 433 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 C1GALT1Q9NS00 363 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 GPATCH2Q9NW75 528 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 MS4A12Q9NXJ0 267 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 UTS2RQ9UKP6 389 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 CES1P1Q9UKY3 287 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 PSME2Q9UL46 239 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 ATG4BQ9Y4P1 393 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 PCDHGB2Q9Y5G2 931 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 SLC22A7Q9Y694 548 aa14.52□□□□□ -0.08
COPS3-201ENST00000268717 GOLGA4Q13439 2230 aaKnown RBP14.52□□□□□ -0.09
COPS3-201ENST00000268717 A0A1W2PR48 441 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 MYO1GB0I1T2 1018 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 H0YGG7 62 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 P2RX6O15547 441 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 SH3BP5O60239 455 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 DEAF1O75398 565 aaPredicted RBP14.52□□□□□ -0.09
COPS3-201ENST00000268717 PRSS23O95084 383 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 AIFM1O95831 613 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 SERPINA1P01009 418 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 LDLRP01130 860 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 ZNF888P0CJ79 500 aaPredicted RBP14.52□□□□□ -0.09
COPS3-201ENST00000268717 ZNF26P17031 533 aaPredicted RBP14.52□□□□□ -0.09
COPS3-201ENST00000268717 ALOX12P18054 663 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 KDELR2P33947 212 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 SOX11P35716 441 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 CHI3L1P36222 383 aaPredicted RBP14.52□□□□□ -0.09
COPS3-201ENST00000268717 BUD31P41223 144 aaPredicted RBP14.52□□□□□ -0.09
COPS3-201ENST00000268717 AQP4P55087 323 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 ARF3P61204 181 aaPredicted RBP14.52□□□□□ -0.09
COPS3-201ENST00000268717 BTN3A2P78410 334 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 BIRC2Q13490 618 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 C6orf132Q5T0Z8 1188 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.52□□□□□ -0.09
COPS3-201ENST00000268717 TMEM214Q6NUQ4 689 aaKnown RBP14.52□□□□□ -0.09
COPS3-201ENST00000268717 TLDC1Q6P9B6 456 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 NAXDQ8IW45 347 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 CD180Q99467 661 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 ELF4Q99607 663 aaPredicted RBP14.52□□□□□ -0.09
COPS3-201ENST00000268717 BDH2Q9BUT1 245 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 LYRM4Q9HD34 91 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 THUMPD1Q9NXG2 353 aaKnown RBP14.52□□□□□ -0.09
COPS3-201ENST00000268717 RAB26Q9ULW5 256 aa14.52□□□□□ -0.09
COPS3-201ENST00000268717 FAF1Q9UNN5 650 aaPredicted RBP14.52□□□□□ -0.09
COPS3-201ENST00000268717 RNF103-CHMP3A0A140T963 221 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 A0A1B0GTQ1 180 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 B3GALT2O43825 422 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 STATHP02808 62 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 NR2F6P10588 404 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 PVRP15151 417 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 TYRP1P17643 537 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 CDH3P22223 829 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 MAGEA2P43356 314 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 TXNL4AP83876 142 aaKnown RBP14.51□□□□□ -0.09
COPS3-201ENST00000268717 TNFRSF17Q02223 184 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 ZNF630Q2M218 657 aaPredicted RBP14.51□□□□□ -0.09
COPS3-201ENST00000268717 TMTC4Q5T4D3 741 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 GCNT6Q5T4J0 391 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 FRMPD2BQ6IN97 320 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 PPP4R4Q6NUP7 873 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 NIPAL1Q6NVV3 410 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 CCDC80Q76M96 950 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 ZNF438Q7Z4V0 828 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 AMIGO2Q86SJ2 522 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 ZNF761Q86XN6 746 aaPredicted RBP14.51□□□□□ -0.09
COPS3-201ENST00000268717 ARL10Q8N8L6 244 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 PNPT1Q8TCS8 783 aaKnown RBP14.51□□□□□ -0.09
COPS3-201ENST00000268717 SFXN5Q8TD22 340 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 EXOSC8Q96B26 276 aaKnown RBP14.51□□□□□ -0.09
COPS3-201ENST00000268717 MOAP1Q96BY2 351 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 SLC47A1Q96FL8 570 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 TCTN2Q96GX1 697 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 PYURFQ96I23 114 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 AMDHD1Q96NU7 426 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 SEPHS2Q99611 448 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 C9orf16Q9BUW7 83 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 ASPSCR1Q9BZE9 553 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 SEMA6AQ9H2E6 1030 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 SIRT3Q9NTG7 399 aaPredicted RBP14.51□□□□□ -0.09
COPS3-201ENST00000268717 GIMAP4Q9NUV9 329 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 ZNF639Q9UID6 485 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 ENTPD4Q9Y227 616 aa14.51□□□□□ -0.09
COPS3-201ENST00000268717 TPRP12270 2363 aaKnown RBP14.5□□□□□ -0.09
COPS3-201ENST00000268717 NUP214P35658 2090 aaPredicted RBP14.5□□□□□ -0.09
COPS3-201ENST00000268717 LOC105369274A0A096LPK9 316 aa14.5□□□□□ -0.09
COPS3-201ENST00000268717 LOC102723532A0A0G2JNH3 316 aa14.5□□□□□ -0.09
COPS3-201ENST00000268717 CLOCKO15516 846 aa14.5□□□□□ -0.09
COPS3-201ENST00000268717 FLRT2O43155 660 aa14.5□□□□□ -0.09
COPS3-201ENST00000268717 NUDT21O43809 227 aaKnown RBP14.5□□□□□ -0.09
COPS3-201ENST00000268717 PCDHGA12O60330 932 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms