RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 PEBP4Q96S96 227 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 AGO3Q9H9G7 860 aaKnown RBP12.46□□□□□ -0.41
TMEM260-201ENST00000261556 TPT1P8Q9HAU6 139 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 DHRS7Q9Y394 339 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 SLIT2O94813 1529 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 A0A0A6YYJ9 748 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 GATCO43716 136 aaKnown RBP12.46□□□□□ -0.41
TMEM260-201ENST00000261556 FGF1P05230 155 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 TPOP07202 933 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 CSF3P09919 207 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 ALDOCP09972 364 aaKnown RBP12.46□□□□□ -0.41
TMEM260-201ENST00000261556 SLC35E2BP0CK96 405 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 FPR1P21462 350 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 PAICSP22234 425 aaKnown RBP12.46□□□□□ -0.41
TMEM260-201ENST00000261556 FAM151BQ6UXP7 276 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 SPATA19Q7Z5L4 167 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 RNF130Q86XS8 419 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 FUNDC1Q8IVP5 155 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 DENND6BQ8NEG7 585 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 C9orf43Q8TAL5 461 aaPredicted RBP12.46□□□□□ -0.41
TMEM260-201ENST00000261556 NSMAFQ92636 917 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 PIWIL1Q96J94 861 aaKnown RBP12.46□□□□□ -0.41
TMEM260-201ENST00000261556 MBOAT4Q96T53 435 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 VRK1Q99986 396 aaPredicted RBP12.46□□□□□ -0.41
TMEM260-201ENST00000261556 MEAF6Q9HAF1 191 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 TMPRSS4Q9NRS4 437 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 ZNF275Q9NSD4 429 aaPredicted RBP12.46□□□□□ -0.41
TMEM260-201ENST00000261556 PPP6CO00743 305 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 ADAM12O43184 909 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 SIGLEC6O43699 453 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 OR4F21O95013 312 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 CEBPGP53567 150 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 PSMD4P55036 377 aaKnown RBP12.46□□□□□ -0.42
TMEM260-201ENST00000261556 PTSQ03393 145 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 FOXM1Q08050 763 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 ETFDHQ16134 617 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 KHDRBS2Q5VWX1 349 aaKnown RBP12.46□□□□□ -0.42
TMEM260-201ENST00000261556 SLITRK4Q8IW52 837 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 C7orf61Q8IZ16 206 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 SLC13A3Q8WWT9 602 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 FBXO17Q96EF6 278 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 PAPOLGQ9BWT3 736 aaKnown RBP12.46□□□□□ -0.42
TMEM260-201ENST00000261556 TMEM185BQ9H7F4 350 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 TAS2R7Q9NYW3 318 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 COQ4Q9Y3A0 265 aa12.46□□□□□ -0.42
TMEM260-201ENST00000261556 ANKDD1BA6NHY2 528 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 RFXAPO00287 272 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 DSCR3O14972 297 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 POP7O75817 140 aaKnown RBP12.45□□□□□ -0.42
TMEM260-201ENST00000261556 GPX3P22352 226 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 PPP2R1BP30154 601 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 CLCN7P51798 805 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 AP1S2P56377 157 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 SPHARQ15513 63 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 PROX2Q3B8N5 592 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 ATAT1Q5SQI0 421 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 C3orf33Q6P1S2 294 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 TSPAN33Q86UF1 283 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 FAM124AQ86V42 546 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 ARL14EPQ8N8R7 260 aaPredicted RBP12.45□□□□□ -0.42
TMEM260-201ENST00000261556 SCAMP5Q8TAC9 235 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 HMGB4Q8WW32 186 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 ZNF516Q92618 1163 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 C3orf49Q96BT1 292 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 PYURFQ96I23 114 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 SAMD11Q96NU1 681 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 FAM220BPB1ANY3 271 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 SULT1C2O00338 296 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 RFXANKO14593 260 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 PROM1O43490 865 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 ACSL1P33121 698 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 CPSF6Q16630 551 aaKnown RBP eCLIP12.45□□□□□ -0.42
TMEM260-201ENST00000261556 GPRIN3Q6ZVF9 776 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 TIPARPQ7Z3E1 657 aaKnown RBP12.45□□□□□ -0.42
TMEM260-201ENST00000261556 TAC4Q86UU9 113 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 SAMD12Q8N8I0 201 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 OR10K1Q8NGX5 313 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 MAP3K3Q99759 626 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 STRCQ7RTU9 1775 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.45□□□□□ -0.42
TMEM260-201ENST00000261556 FAM234BA2RU67 622 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 MROH6A6NGR9 719 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 SUV39H1O43463 412 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 AKAP8O43823 692 aaKnown RBP12.45□□□□□ -0.42
TMEM260-201ENST00000261556 HCN1O60741 890 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 RNGTTO60942 597 aaKnown RBP12.45□□□□□ -0.42
TMEM260-201ENST00000261556 STBD1O95210 358 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 EOMESO95936 686 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 OPN1SWP03999 348 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 GIFP27352 417 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 GNPDA1P46926 289 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 YBEYP58557 167 aaPredicted RBP12.45□□□□□ -0.42
TMEM260-201ENST00000261556 CREB5Q02930 508 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 MAD2L1Q13257 205 aaPredicted RBP12.45□□□□□ -0.42
TMEM260-201ENST00000261556 SP140Q13342 867 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 ASAH1Q13510 395 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 GK2Q14410 553 aaPredicted RBP12.45□□□□□ -0.42
TMEM260-201ENST00000261556 MBTPS1Q14703 1052 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 TCTE1Q5JU00 501 aa12.45□□□□□ -0.42
TMEM260-201ENST00000261556 RBFAQ8N0V3 343 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms