RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 LATO43561 262 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 JMJD7P0C870 316 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 NDC1Q9BTX1 674 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 TRIM2Q9C040 744 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 CD2P06729 351 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 SRPRAP08240 638 aaKnown RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 HNF4GQ14541 408 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 METTL2BQ6P1Q9 378 aaKnown RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 SLC36A4Q6YBV0 504 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 OR5T2Q8NGG2 359 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 FAM227AF5H4B4 570 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 I6L893 689 aaPredicted RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 ARPC5O15511 151 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 RFC2P35250 354 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 TMBIM6P55061 237 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 OC90Q02509 493 aaPredicted RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 MFSD2AQ8NA29 543 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 OR5H6Q8NGV6 325 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 ELMOD3Q96FG2 381 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 MRGPRX2Q96LB1 330 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 MRPL22Q9NWU5 206 aaKnown RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 CD1DP15813 335 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 RAB6AP20340 208 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 MASP1P48740 699 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 P2RY14Q15391 338 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 C2orf27AQ580R0 203 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 TECPR1Q7Z6L1 1165 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 DTWD1Q8N5C7 304 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 NCSTNQ92542 709 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 FAM163AQ96GL9 167 aaPredicted RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 C3orf30Q96M34 536 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 PI4KAP42356 2102 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 CICQ96RK0 1608 aaPredicted RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 CNOT4O95628 575 aaKnown RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 TSPAN33Q86UF1 283 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 CYB561A3Q8NBI2 242 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 GALNT9Q9HCQ5 603 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 TEX10Q9NXF1 929 aaPredicted RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 A0A1W2PRU2 124 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 DLGAP1O14490 977 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 APOC1P02654 83 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 HAPLN1P10915 354 aaPredicted RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 CNR2P34972 360 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 ZNF45Q02386 682 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 NIPAL4Q0D2K0 466 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 PLBD1Q6P4A8 553 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 FAM46DQ8NEK8 389 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 PAQR8Q8TEZ7 354 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 BORCS6Q96GS4 357 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 BIRC8Q96P09 236 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 FAM83CQ9BQN1 747 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 NECTIN3Q9NQS3 549 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 P2RX2Q9UBL9 471 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 B3GALT2O43825 422 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 GATBO75879 557 aaKnown RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 NKX3-2P78367 333 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 NPAS3Q8IXF0 933 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 NXPE2Q96DL1 559 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 ARPC4-TTLL3A0A0A6YYG9 625 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 SREBF2Q12772 1141 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 APOFQ13790 326 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 FAM46CQ5VWP2 391 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 TRUB1Q8WWH5 349 aaKnown RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 CCM2LQ9NUG4 571 aaPredicted RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 NUAK1O60285 661 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 GJB5O95377 273 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 GNSP15586 552 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 ERVPABLB-1P60509 514 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 GRIN2CQ14957 1233 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 CNIH2Q6PI25 160 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 NPWQ8N729 165 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 ZUFSPQ96AP4 578 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 CNIH4Q9P003 139 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 AK6Q9Y3D8 172 aaKnown RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 MSCO60682 206 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 PTH2RP49190 550 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 AADACL4Q5VUY2 407 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 NOXRED1Q6NXP6 359 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 GTF2H4Q92759 462 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 IGSF8Q969P0 613 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 NTN4Q9HB63 628 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 CRTAC1Q9NQ79 661 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 TBCCD1Q9NVR7 557 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 EMCNQ9ULC0 261 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 MAFBQ9Y5Q3 323 aaPredicted RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 ANKRD33BA6NCL7 494 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 ARPC1BO15143 372 aaKnown RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 BMP4P12644 408 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 PRPS1L1P21108 318 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 SLCO2A1Q92959 643 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 SSX3Q99909 188 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 NIFKQ9BYG3 293 aaKnown RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 TAS2R10Q9NYW0 307 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 C7orf72A4D263 438 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 WDPCPO95876 746 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 ALG11Q2TAA5 492 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 CDNFQ49AH0 187 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 NDUFAF5Q5TEU4 345 aa7.21□□□□□ -1.25
RIF1-201ENST00000243326 PRDM16Q9HAZ2 1276 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms