RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 GPX2P18283 190 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 NCBP2P52298 156 aaKnown RBP eCLIP17.52■□□□□ 0.4
SNX17-201ENST00000233575 MVDP53602 400 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 ID2Q02363 134 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 SPEM2Q0P670 501 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 C16orf72Q14CZ0 275 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 COX20Q5RI15 118 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.52■□□□□ 0.4
SNX17-201ENST00000233575 ANGPTL8Q6UXH0 198 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 SPATA24Q86W54 205 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 KMT5CQ86Y97 462 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 TTC29Q8NA56 475 aaPredicted RBP17.52■□□□□ 0.4
SNX17-201ENST00000233575 PRSS33Q8NF86 280 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 RHBDD1Q8TEB9 315 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 FAM120BQ96EK7 910 aaKnown RBP17.52■□□□□ 0.4
SNX17-201ENST00000233575 CCDC74BQ96LY2 380 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 BBS4Q96RK4 519 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 DPH2Q9BQC3 489 aaPredicted RBP17.52■□□□□ 0.4
SNX17-201ENST00000233575 RNPEPL1Q9HAU8 725 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 ACSS1Q9NUB1 689 aaPredicted RBP17.52■□□□□ 0.4
SNX17-201ENST00000233575 PCDHB3Q9Y5E6 796 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 PCDHGB2Q9Y5G2 931 aa17.52■□□□□ 0.4
SNX17-201ENST00000233575 MYOCOSA0A1B0GUC4 107 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 EVPLLA8MZ36 301 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 MYO1GB0I1T2 1018 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 CHST10O43529 356 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 HYAL3O43820 417 aaPredicted RBP17.52■□□□□ 0.39
SNX17-201ENST00000233575 LDOC1O95751 146 aaPredicted RBP17.52■□□□□ 0.39
SNX17-201ENST00000233575 NUDT7P0C024 238 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 ZNF806P0C7X5 589 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 FAM53BQ14153 422 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 GRM7Q14831 915 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 NDUFA9Q16795 377 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 NATD1Q8N6N6 113 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 JADE3Q92613 823 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 ZNF501Q96CX3 271 aaPredicted RBP17.52■□□□□ 0.39
SNX17-201ENST00000233575 FGF21Q9NSA1 209 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 MS4A12Q9NXJ0 267 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 CLCA2Q9UQC9 943 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 ENTPD4Q9Y227 616 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 WDFY3Q8IZQ1 3526 aa17.52■□□□□ 0.39
SNX17-201ENST00000233575 TOX3O15405 576 aaPredicted RBP17.51■□□□□ 0.39
SNX17-201ENST00000233575 LDB3O75112 727 aa17.51■□□□□ 0.39
SNX17-201ENST00000233575 CKMT2P17540 419 aa17.51■□□□□ 0.39
SNX17-201ENST00000233575 NTSP30990 170 aa17.51■□□□□ 0.39
SNX17-201ENST00000233575 DUSP3P51452 185 aaPredicted RBP17.51■□□□□ 0.39
SNX17-201ENST00000233575 SPIDRQ14159 915 aa17.51■□□□□ 0.39
SNX17-201ENST00000233575 INAVAQ3KP66 663 aa17.51■□□□□ 0.39
SNX17-201ENST00000233575 TMTC4Q5T4D3 741 aa17.51■□□□□ 0.39
SNX17-201ENST00000233575 GARNL3Q5VVW2 1013 aa17.51■□□□□ 0.39
SNX17-201ENST00000233575 OR52E8Q6IFG1 317 aa17.51■□□□□ 0.39
SNX17-201ENST00000233575 S100A14Q9HCY8 104 aa17.51■□□□□ 0.39
SNX17-201ENST00000233575 ACTR3BQ9P1U1 418 aa17.51■□□□□ 0.39
SNX17-201ENST00000233575 DHCR7Q9UBM7 475 aaKnown RBP17.51■□□□□ 0.39
SNX17-201ENST00000233575 SNX13Q9Y5W8 968 aa17.51■□□□□ 0.39
SNX17-201ENST00000233575 MAU2Q9Y6X3 613 aa17.51■□□□□ 0.39
SNX17-201ENST00000233575 RNF103-CHMP3A0A140T963 221 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 FLRT2O43155 660 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 NSA2O95478 260 aaKnown RBP17.5■□□□□ 0.39
SNX17-201ENST00000233575 ANKRD34CP0C6C1 535 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 CD59P13987 128 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 DDX5P17844 614 aaKnown RBP17.5■□□□□ 0.39
SNX17-201ENST00000233575 TLX1P31314 330 aaPredicted RBP17.5■□□□□ 0.39
SNX17-201ENST00000233575 ABHD18Q0P651 414 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 MLC1Q15049 377 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 RGNQ15493 299 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 CEBPEQ15744 281 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 SNCBQ16143 134 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 LCN8Q6JVE9 175 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 RNF111Q6ZNA4 994 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 TTLL10Q6ZVT0 673 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 B3GNT8Q7Z7M8 397 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 TRIML2Q8N7C3 387 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 FAM110BQ8TC76 370 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 MMABQ96EY8 250 aaPredicted RBP17.5■□□□□ 0.39
SNX17-201ENST00000233575 PEX11GQ96HA9 241 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 GFM1Q96RP9 751 aaKnown RBP17.5■□□□□ 0.39
SNX17-201ENST00000233575 NPLQ9BXD5 320 aaPredicted RBP17.5■□□□□ 0.39
SNX17-201ENST00000233575 CHST8Q9H2A9 424 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 EPS8L2Q9H6S3 715 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 DCLRE1BQ9H816 532 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 CUTCQ9NTM9 273 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 RAPGEFL1Q9UHV5 662 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 ELOVL7A1L3X0 281 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 FAM220BPB1ANY3 271 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 H3BNX3 289 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 FGF17O60258 216 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 KCNK5O95279 499 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 GGT1P19440 569 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 UQCRC2P22695 453 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 CHI3L1P36222 383 aaPredicted RBP17.5■□□□□ 0.39
SNX17-201ENST00000233575 RAB38P57729 211 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 RPS26P62854 115 aaKnown RBP17.5■□□□□ 0.39
SNX17-201ENST00000233575 FOLH1Q04609 750 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 LTB4RQ15722 352 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 ADRM1Q16186 407 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 CYP51A1Q16850 503 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 GLYATQ6IB77 296 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 SERPINA11Q86U17 422 aa17.5■□□□□ 0.39
SNX17-201ENST00000233575 RNF130Q86XS8 419 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms