RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 IDSP22304 550 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 PREPP48147 710 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 SPINT3P49223 89 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 MC1RQ01726 317 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 C2orf80Q0P641 193 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 GPR50Q13585 617 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 VEZF1Q14119 521 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 CPTPQ5TA50 214 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 DNAJC22Q8N4W6 341 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 IGSF21Q96ID5 467 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 TMEM175Q9BSA9 504 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 DOHHQ9BU89 302 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 GABARAPL3Q9BY60 117 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 IL21Q9HBE4 155 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 RYDENQ9NUL5 291 aaKnown RBP8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 SPATA6Q9NWH7 488 aaPredicted RBP8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 FAM120CQ9NX05 1096 aaKnown RBP8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 CFAP97Q9P2B7 532 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZMAT5Q9UDW3 170 aaKnown RBP8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 BACE2Q9Y5Z0 518 aa8.98□□□□□ -0.97
HLA-DOA-201ENST00000229829 HELZP42694 1942 aaKnown RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 TMEM265A0A087WTH1 108 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 NPIPB8E9PQR5 432 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 SAP18O00422 153 aaKnown RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 CKMT1AP12532 417 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 HLA-FP30511 346 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 TIE1P35590 1138 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 GGT2P36268 569 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 UGT2B15P54855 530 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 CCL23P55773 120 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 C19orf57Q0VDD7 668 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 RNASE12Q5GAN4 147 aaKnown RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 CDKL4Q5MAI5 379 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 MSANTD1Q6ZTZ1 278 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 Q6ZVL8 140 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 KIAA1958Q8N8K9 716 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 OR10G2Q8NGC3 310 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 WDR36Q8NI36 951 aaKnown RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 TRMT2BQ96GJ1 504 aaKnown RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 EPYCQ99645 322 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 SPATA9Q9BWV2 254 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 SGK2Q9HBY8 427 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 SMURF1Q9HCE7 757 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 GALNT9Q9HCQ5 603 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 RUVBL1Q9Y265 456 aaKnown RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 GRIP1Q9Y3R0 1128 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 GNG14A0A1W2PPG7 69 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 CLCA1A8K7I4 914 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 PITPNM1O00562 1244 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 CDK1P06493 297 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 HOXB6P17509 224 aaKnown RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 PIK3CBP42338 1070 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 MVDP53602 400 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 DSTNP60981 165 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 SELENOWP63302 87 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 HBA1P69905 142 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 ELP6Q0PNE2 266 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 ST3GAL4Q11206 333 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 VEPH1Q14D04 833 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 EXOC3L2Q2M3D2 409 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 WSCD2Q2TBF2 565 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 USP45Q70EL2 814 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC46A3Q7Z3Q1 461 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 ABI3BPQ7Z7G0 1075 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC34A3Q8N130 599 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC37A3Q8NCC5 494 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 OR5AK3PQ8NH89 298 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 GTPBP3Q969Y2 492 aaKnown RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 ECHDC3Q96DC8 303 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 CAPNS2Q96L46 248 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 RACGAP1Q9H0H5 632 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 C12orf10Q9HB07 376 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 BEX1Q9HBH7 125 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 MRPL39Q9NYK5 338 aaKnown RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 RHCGQ9UBD6 479 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 SPASTQ9UBP0 616 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 NUP50Q9UKX7 468 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 DUSP12Q9UNI6 340 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 PCDHGA2Q9Y5H1 932 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 PCDH17O14917 1159 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC16A8O95907 504 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 GABRR2P28476 465 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 BDKRB1P46663 353 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 CSNK1DP48730 415 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 EIF2B5Q13144 721 aaKnown RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 GANABQ14697 944 aaKnown RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 ASTLQ6HA08 431 aaPredicted RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 BHLHB9Q6PI77 547 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 Q6ZVU0 165 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 GAREM2Q75VX8 874 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 HSD11B1LQ7Z5J1 315 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 DEFB128Q7Z7B8 93 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 NPAS3Q8IXF0 933 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 OR4A15Q8NGL6 344 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 HUS1BQ8NHY5 278 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 ASB15Q8WXK1 588 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 CIDECQ96AQ7 238 aaPredicted RBP8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 OR5M11Q96RB7 305 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 ASPNQ9BXN1 380 aa8.97□□□□□ -0.97
HLA-DOA-201ENST00000229829 RNF121Q9H920 327 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms