RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 SNX7Q9UNH6 387 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 ANGPT4Q9Y264 503 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 PCDHGB3Q9Y5G1 929 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 TNFRSF11BO00300 401 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 TNFRSF10CO14798 259 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 ERAL1O75616 437 aaKnown RBP13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 HTR1AP08908 422 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 TFPTP0C1Z6 253 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 F3P13726 295 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 NDUFS1P28331 727 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 GSTM5P46439 218 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 IL5RAQ01344 420 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 ZNF542PQ5EBM4 170 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 LAIR1Q6GTX8 287 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 REEP3Q6NUK4 255 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 TTC29Q8NA56 475 aaPredicted RBP13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 PSMA8Q8TAA3 256 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 LZICQ8WZA0 190 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 TMEM19Q96HH6 336 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 ACSS1Q9NUB1 689 aaPredicted RBP13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 DDX18Q9NVP1 670 aaKnown RBP13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 CDC14AQ9UNH5 594 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 CYP8B1Q9UNU6 501 aa13.66□□□□□ -0.22
PRKAB1-201ENST00000229328 PRAMEF27A3QJZ7 478 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 C10orf142B7Z368 130 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 KDM1AO60341 852 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 AIFM1O95831 613 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 C8orf89P0DMQ9 161 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 BMP8BP34820 402 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 RYKP34925 604 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 NCBP2P52298 156 aaKnown RBP eCLIP13.65□□□□□ -0.229e-6■□□□□ 8.7
PRKAB1-201ENST00000229328 CDH12P55289 794 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 ESRRGP62508 458 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 CDK5R2Q13319 367 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 ELOAQ14241 798 aaKnown RBP13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 FBXO43Q4G163 708 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 SZRD1Q7Z422 152 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 FBLIM1Q8WUP2 373 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 OTUB1Q96FW1 271 aaPredicted RBP13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 MAGED4Q96JG8 741 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 A4GALTQ9NPC4 353 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 RLIMQ9NVW2 624 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 PAK1IP1Q9NWT1 392 aaPredicted RBP13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 USP36Q9P275 1121 aaKnown RBP13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 FANCMQ8IYD8 2048 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 SH3BP5O60239 455 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 UGT2B11O75310 529 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 CELA2BP08218 269 aaPredicted RBP13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 YPEL5P62699 121 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 SPIBQ01892 262 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 ROR2Q01974 943 aaKnown RBP13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 FOXD4Q12950 439 aaPredicted RBP13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 GPR18Q14330 331 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 MLC1Q15049 377 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 OR5D16Q8NGK9 328 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 OR4C15Q8NGM1 316 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 UBE2FQ969M7 185 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 CNRIP1Q96F85 164 aaPredicted RBP13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 FAIM2Q9BWQ8 316 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 KLHL25Q9H0H3 589 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 CXorf21Q9HAI6 301 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 THSD1Q9NS62 852 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 EHD3Q9NZN3 535 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 SLCO1B1Q9Y6L6 691 aa13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 ARHGEF17Q96PE2 2063 aaPredicted RBP13.65□□□□□ -0.22
PRKAB1-201ENST00000229328 SLC1A7O00341 560 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 ZW10O43264 779 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 XPNPEP2O43895 674 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 POLR2CP19387 275 aaPredicted RBP13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 MAGP20916 626 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 GPC1P35052 558 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 IL18R1Q13478 541 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 PUM1Q14671 1186 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 GPR19Q15760 415 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 XAF1Q6GPH4 301 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 FBXO42Q6P3S6 717 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 OLIG3Q7RTU3 272 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 CCDC71Q8IV32 467 aaPredicted RBP13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 CCDC116Q8IYX3 515 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 TBC1D19Q8N5T2 526 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 BPIFB6Q8NFQ5 453 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 OR10G6Q8NH81 332 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 SUN3Q8TAQ9 357 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 ZFAND2BQ8WV99 257 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 GEMIN6Q8WXD5 167 aaKnown RBP13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 TOE1Q96GM8 510 aaKnown RBP13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 OR2A14Q96R47 310 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 FEVQ99581 238 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 FANCEQ9HB96 536 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 TRNAU1APQ9NX07 287 aaKnown RBP13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 NDRG4Q9ULP0 352 aaKnown RBP13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 C5orf58C9J3I9 102 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 IFNA14P01570 189 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 OR12D1P0DN82 309 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 DDX5P17844 614 aaKnown RBP13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 GSTM2P28161 218 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 FEN1P39748 380 aaKnown RBP13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 XCR1P46094 333 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 KEAP1Q14145 624 aa13.64□□□□□ -0.23
PRKAB1-201ENST00000229328 SKIV2LQ15477 1246 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms