RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TSPAN15O95858 294 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 CYB5AP00167 134 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 RENP00797 406 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 ALPPL2P10696 532 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 ZNF20P17024 532 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 AQP2P41181 271 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 ASPAP45381 313 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 RACK1P63244 317 aaKnown RBP10.04□□□□□ -0.8
VCL-201ENST00000211998 GRHL2Q6ISB3 625 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 OTOP2Q7RTS6 562 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 KLBQ86Z14 1044 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 C1orf52Q8N6N3 182 aaKnown RBP10.04□□□□□ -0.8
VCL-201ENST00000211998 PROKR2Q8NFJ6 384 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 OR8J1Q8NGP2 316 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 LMLNQ96KR4 655 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 POTEKPQ9BYX7 375 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 NIT2Q9NQR4 276 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 SLIT2O94813 1529 aa10.04□□□□□ -0.8
VCL-201ENST00000211998 A8MUA0 341 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 MRPS14O60783 128 aaKnown RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 EPOP01588 193 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 C8AP07357 584 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 MRPL3P09001 348 aaKnown RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 CLUP10909 449 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 RBMXP38159 391 aaKnown RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 NRG3P56975 720 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 SP2Q02086 613 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 SLC10A6Q3KNW5 377 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 UBXN11Q5T124 520 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 FOXB2Q5VYV0 432 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 FRG2Q64ET8 278 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 TERB2Q8NHR7 220 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 FRG2BQ96QU4 278 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 RANBP9Q96S59 729 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 TREX2Q9BQ50 279 aaPredicted RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 WRAP53Q9BUR4 548 aaKnown RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 KCNH6Q9H252 994 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 UNKLQ9H9P5 680 aaKnown RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 ABI3Q9P2A4 366 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 COPS3Q9UNS2 423 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 ASB4Q9Y574 426 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 C7orf72A4D263 438 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 PI15O43692 258 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 INHAP05111 366 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 CRHBPP24387 322 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 CD34P28906 385 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 PITPNBP48739 271 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 NCBP2P52298 156 aaKnown RBP eCLIP10.03□□□□□ -0.82e-6■□□□□ 9.8
VCL-201ENST00000211998 PROX2Q3B8N5 592 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 SLC35F1Q5T1Q4 408 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 FAM205BPQ63HN1 556 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 OSTF1Q92882 214 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 DOHHQ9BU89 302 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 TAPBPLQ9BX59 468 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 AGPAT4Q9NRZ5 378 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 NOX1Q9Y5S8 564 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 MYBPHLA2RUH7 354 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 CA12O43570 354 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 OR1F1O43749 312 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 SNRNP70P08621 437 aaKnown RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 HTR1AP08908 422 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 HOXD8P13378 290 aaPredicted RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 IVDP26440 423 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 WASP42768 502 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 RAB8AP61006 207 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 MLLT1Q03111 559 aaPredicted RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 FPGSQ05932 587 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 ST3GAL3Q11203 375 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 PLEKHN1Q494U1 663 aaPredicted RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 MAPK15Q8TD08 544 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 ZNF516Q92618 1163 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 OTUB2Q96DC9 234 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 SLC29A3Q9BZD2 475 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 MKKSQ9NPJ1 570 aaPredicted RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 SLC45A1Q9Y2W3 748 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 Q9Y3F1 56 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 PCDHGA8Q9Y5G5 932 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 PIGRP01833 764 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 DHRS4L1P0CG22 281 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 GMPRP36959 345 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 EIF2DP41214 584 aaKnown RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 VSX2P58304 361 aaPredicted RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 GPR33Q49SQ1 333 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 TMEM220Q6QAJ8 160 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 NPAS3Q8IXF0 933 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 TTLQ8NG68 377 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 GRHL3Q8TE85 626 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 PIP5K1AQ99755 562 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 SLAMF7Q9NQ25 335 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 A0A096LPI6 279 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 PRSS51A0A1B0GVH4 220 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 UNCXA6NJT0 531 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 HLA-DQB2P05538 268 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 HLA-EP13747 358 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 M6PRP20645 277 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 OXTRP30559 389 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 KDELR2P33947 212 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 GDF5P43026 501 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 SOX2P48431 317 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 MASP1P48740 699 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms