RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 STX16O14662 325 aa23.46■■□□□ 1.35
VEGFA-232ENST00000640653 CLDN9O95484 217 aa23.46■■□□□ 1.35
VEGFA-232ENST00000640653 TLX1P31314 330 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-232ENST00000640653 CA7P43166 264 aa23.46■■□□□ 1.35
VEGFA-232ENST00000640653 SPTBN1Q01082 2364 aaKnown RBP23.46■■□□□ 1.35
VEGFA-232ENST00000640653 MTFR2Q6P444 385 aa23.46■■□□□ 1.35
VEGFA-232ENST00000640653 GPR180Q86V85 440 aa23.46■■□□□ 1.35
VEGFA-232ENST00000640653 ZGRF1Q86YA3 2104 aa23.46■■□□□ 1.35
VEGFA-232ENST00000640653 POGLUT1Q8NBL1 392 aa23.46■■□□□ 1.35
VEGFA-232ENST00000640653 DCAKDQ8WVC6 231 aa23.46■■□□□ 1.35
VEGFA-232ENST00000640653 MAGED4Q96JG8 741 aa23.46■■□□□ 1.35
VEGFA-232ENST00000640653 TSPAN10Q9H1Z9 355 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-232ENST00000640653 RPF2Q9H7B2 306 aaKnown RBP23.46■■□□□ 1.35
VEGFA-232ENST00000640653 NOL11Q9H8H0 719 aaKnown RBP23.46■■□□□ 1.35
VEGFA-232ENST00000640653 PSD3Q9NYI0 1048 aa23.46■■□□□ 1.35
VEGFA-232ENST00000640653 NPIPA1Q9UND3 350 aa23.46■■□□□ 1.35
VEGFA-232ENST00000640653 RNF11Q9Y3C5 154 aa23.46■■□□□ 1.35
VEGFA-232ENST00000640653 SVILO95425 2214 aa23.45■■□□□ 1.35
VEGFA-232ENST00000640653 EXOC1LA0A1B0GW35 172 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 KLRC4-KLRK1H3BQV0 150 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 PRKNO60260 465 aaPredicted RBP23.45■■□□□ 1.34
VEGFA-232ENST00000640653 SLC19A2O60779 497 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 COX7A2P14406 83 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 ZNF24P17028 368 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 COL8A1P27658 744 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 CCNG1P51959 295 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 BIKQ13323 160 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 CUL3Q13618 768 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 LGSNQ5TDP6 509 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 GPALPP1Q8IXQ4 340 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 IFT20Q8IY31 132 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 CPSF7Q8N684 471 aaKnown RBP23.45■■□□□ 1.34
VEGFA-232ENST00000640653 ANKRD9Q96BM1 317 aaPredicted RBP23.45■■□□□ 1.34
VEGFA-232ENST00000640653 OR8D2Q9GZM6 311 aa23.45■■□□□ 1.34
VEGFA-232ENST00000640653 FOXE1O00358 373 aaPredicted RBP23.44■■□□□ 1.34
VEGFA-232ENST00000640653 CCL21O00585 134 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 WISP2O76076 250 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 ABHD2P08910 425 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 SNRPAP09012 282 aaKnown RBP23.44■■□□□ 1.34
VEGFA-232ENST00000640653 BUD31P41223 144 aaPredicted RBP23.44■■□□□ 1.34
VEGFA-232ENST00000640653 TNFRSF17Q02223 184 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 ID2Q02363 134 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 SIAH3Q8IW03 269 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 OR8K3Q8NH51 312 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 WDR20Q8TBZ3 569 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 SLC2A12Q8TD20 617 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 ASB15Q8WXK1 588 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 TANKQ92844 425 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 DGAT2Q96PD7 388 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 MRPL57Q9BQC6 102 aaKnown RBP23.44■■□□□ 1.34
VEGFA-232ENST00000640653 TIMMDC1Q9NPL8 285 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 LYARQ9NX58 379 aaKnown RBP23.44■■□□□ 1.34
VEGFA-232ENST00000640653 MYOTQ9UBF9 498 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 COPS7AQ9UBW8 275 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 SH3BGRL2Q9UJC5 107 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 NFU1Q9UMS0 254 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 ERVK-11Q9UQG0 969 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 DOPEY1Q5JWR5 2465 aa23.44■■□□□ 1.34
VEGFA-232ENST00000640653 A8MVJ9 347 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 OR7A17O14581 309 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 ASNA1O43681 348 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 DYRK3O43781 588 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 FGF17O60258 216 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 OR2J2O76002 312 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 STT3AP46977 705 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 MEOX1P50221 254 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 IGLV3-21P80748 117 aaPredicted RBP23.43■■□□□ 1.34
VEGFA-232ENST00000640653 CYP20A1Q6UW02 462 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 SULF2Q8IWU5 870 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 GHDCQ8N2G8 530 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 OR52B6Q8NGF0 335 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 OR5L2Q8NGL0 311 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 NTMT1Q9BV86 223 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 MRPL46Q9H2W6 279 aaKnown RBP23.43■■□□□ 1.34
VEGFA-232ENST00000640653 HPF1Q9NWY4 346 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 PCTPQ9UKL6 214 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 PPT2Q9UMR5 302 aa23.43■■□□□ 1.34
VEGFA-232ENST00000640653 TMEM200CA6NKL6 621 aa23.42■■□□□ 1.34
VEGFA-232ENST00000640653 DCTP40126 519 aa23.42■■□□□ 1.34
VEGFA-232ENST00000640653 PLIN5Q00G26 463 aa23.42■■□□□ 1.34
VEGFA-232ENST00000640653 C10orf62Q5T681 223 aaPredicted RBP23.42■■□□□ 1.34
VEGFA-232ENST00000640653 TRMT10CQ7L0Y3 403 aaKnown RBP23.42■■□□□ 1.34
VEGFA-232ENST00000640653 SPPL2CQ8IUH8 684 aa23.42■■□□□ 1.34
VEGFA-232ENST00000640653 OR4N5Q8IXE1 308 aa23.42■■□□□ 1.34
VEGFA-232ENST00000640653 RBM18Q96H35 190 aaKnown RBP23.42■■□□□ 1.34
VEGFA-232ENST00000640653 CCDC120Q96HB5 630 aa23.42■■□□□ 1.34
VEGFA-232ENST00000640653 CDK15Q96Q40 435 aa23.42■■□□□ 1.34
VEGFA-232ENST00000640653 SERPINI1Q99574 410 aa23.42■■□□□ 1.34
VEGFA-232ENST00000640653 DDX31Q9H8H2 851 aaKnown RBP23.42■■□□□ 1.34
VEGFA-232ENST00000640653 LIN28AQ9H9Z2 209 aaKnown RBP23.42■■□□□ 1.34
VEGFA-232ENST00000640653 ZNF835Q9Y2P0 537 aa23.42■■□□□ 1.34
VEGFA-232ENST00000640653 ATG4BQ9Y4P1 393 aa23.42■■□□□ 1.34
VEGFA-232ENST00000640653 CROCCQ5TZA2 2017 aa23.42■■□□□ 1.34
VEGFA-232ENST00000640653 WWP2O00308 870 aa23.41■■□□□ 1.34
VEGFA-232ENST00000640653 PEX1O43933 1283 aa23.41■■□□□ 1.34
VEGFA-232ENST00000640653 BSGP35613 385 aa23.41■■□□□ 1.34
VEGFA-232ENST00000640653 NEK2P51955 445 aa23.41■■□□□ 1.34
VEGFA-232ENST00000640653 HK2P52789 917 aa23.41■■□□□ 1.34
VEGFA-232ENST00000640653 HNRNPH2P55795 449 aaKnown RBP23.41■■□□□ 1.34
VEGFA-232ENST00000640653 RNF4P78317 190 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms