RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 HERC3Q15034 1050 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 ZRSR2Q15696 482 aaKnown RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 TOR1AIP1Q5JTV8 583 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 C1QL3Q5VWW1 255 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 KLC3Q6P597 504 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 ZYG11AQ6WRX3 759 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 QSOX2Q6ZRP7 698 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 NCCRP1Q6ZVX7 275 aaPredicted RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 MAMDC2Q7Z304 686 aaPredicted RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 TBC1D1Q86TI0 1168 aaPredicted RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 WDR75Q8IWA0 830 aaKnown RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 CENPLQ8N0S6 344 aaPredicted RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 FITM2Q8N6M3 262 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 BCORP1Q8N888 145 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 ZNF321PQ8N8H1 164 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 PDPRQ8NCN5 879 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 RELTQ969Z4 430 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 THOC1Q96FV9 657 aaKnown RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 FRMD6Q96NE9 622 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 GPR78Q96P69 363 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 TRIM45Q9H8W5 580 aaPredicted RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 POPDC3Q9HBV1 291 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 GPAMQ9HCL2 828 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 PRDM7Q9NQW5 492 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 SAR1AQ9NR31 198 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 OLAHQ9NV23 265 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 KCMF1Q9P0J7 381 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 ABI3Q9P2A4 366 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 PPIEQ9UNP9 301 aaKnown RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 HRH3Q9Y5N1 445 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 CAPN7Q9Y6W3 813 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 ZNF407Q9C0G0 2248 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 LRBAP50851 2863 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 A0A0G2JND7 137 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 SAGE2PA6NJ88 616 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 WASHC1A8K0Z3 465 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 GABRR3A8MPY1 467 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 A8MUA0 341 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 G3V2L1 256 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 RTCAO00442 366 aaKnown RBP7.32□□□□□ -1.24
PNKP-229ENST00000637897 TRIM13O60858 407 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 KLHL2O95198 593 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 ICAM2P13598 275 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 IL10P22301 178 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 CERS1P27544 350 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 TPP2P29144 1249 aaPredicted RBP7.32□□□□□ -1.24
PNKP-229ENST00000637897 RASSF2P50749 326 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 HK2P52789 917 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 OR4D2P58180 307 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 MLF1P58340 268 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 ABCE1P61221 599 aaKnown RBP7.32□□□□□ -1.24
PNKP-229ENST00000637897 BTN3A2P78410 334 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 ADORA2A-AS1P86434 159 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 PCDH1Q08174 1060 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 DOC2AQ14183 400 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 RBBP5Q15291 538 aaKnown RBP7.32□□□□□ -1.24
PNKP-229ENST00000637897 FAM83EQ2M2I3 478 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 XKR6Q5GH73 641 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 ZNF766Q5HY98 468 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 MFSD4BQ5TF39 518 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 ABHD17CQ6PCB6 329 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 DGAT2L6Q6ZPD8 337 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 ADAMTSL2Q86TH1 951 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 FJX1Q86VR8 437 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 C10orf107Q8IVU9 208 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 C10orf67Q8IYJ2 551 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 PLD6Q8N2A8 252 aaKnown RBP7.32□□□□□ -1.24
PNKP-229ENST00000637897 OR6Y1Q8NGX8 325 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 RFWD2Q8NHY2 731 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 PIWIL2Q8TC59 973 aaKnown RBP7.32□□□□□ -1.24
PNKP-229ENST00000637897 ADAMTS18Q8TE60 1221 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 ITLN2Q8WWU7 325 aaPredicted RBP7.32□□□□□ -1.24
PNKP-229ENST00000637897 METTL21AQ8WXB1 218 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 ATL1Q8WXF7 558 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 UCN3Q969E3 161 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 KIAA1191Q96A73 305 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 NXNL1Q96CM4 212 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 ERP27Q96DN0 273 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 CCDC126Q96EE4 140 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 SCYL1Q96KG9 808 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 C5orf34Q96MH7 638 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 PTCHD1Q96NR3 888 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 MRPL57Q9BQC6 102 aaKnown RBP7.32□□□□□ -1.24
PNKP-229ENST00000637897 AIF1LQ9BQI0 150 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 SORBS1Q9BX66 1292 aaKnown RBP7.32□□□□□ -1.24
PNKP-229ENST00000637897 TMEM120AQ9BXJ8 343 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 ZNF717Q9BY31 904 aaPredicted RBP7.32□□□□□ -1.24
PNKP-229ENST00000637897 MYLK2Q9H1R3 596 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 TSPAN10Q9H1Z9 355 aaPredicted RBP7.32□□□□□ -1.24
PNKP-229ENST00000637897 RASSF4Q9H2L5 321 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 RHBGQ9H310 441 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 CDCP1Q9H5V8 836 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 NT5DC2Q9H857 520 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 LIN28AQ9H9Z2 209 aaKnown RBP7.32□□□□□ -1.24
PNKP-229ENST00000637897 KCNK13Q9HB14 408 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 AGPAT4Q9NRZ5 378 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 DCTN4Q9UJW0 460 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 ZNF835Q9Y2P0 537 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 KCNE2Q9Y6J6 123 aa7.32□□□□□ -1.24
PNKP-229ENST00000637897 CREBBPQ92793 2442 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms