RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ZNF595Q8IYB9 648 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 CD200R1Q8TD46 325 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 ATG4AQ8WYN0 398 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 JSRP1Q96MG2 331 aaPredicted RBP16.61■□□□□ 0.25
CLN6-212ENST00000636020 WFIKKN1Q96NZ8 548 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 GPR21Q99679 349 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 SFXN3Q9BWM7 321 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 NPLQ9BXD5 320 aaPredicted RBP16.61■□□□□ 0.25
CLN6-212ENST00000636020 BFARQ9NZS9 450 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 CNIH4Q9P003 139 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.61■□□□□ 0.252e-6■■□□□ 13.6
CLN6-212ENST00000636020 A8MXE2 369 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 RNF223E7ERA6 249 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 SERPINA6P08185 405 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 F7P08709 466 aaPredicted RBP16.6■□□□□ 0.25
CLN6-212ENST00000636020 CTBP1Q13363 440 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 OASLQ15646 514 aaKnown RBP16.6■□□□□ 0.25
CLN6-212ENST00000636020 NEPROQ6NW34 567 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 ZNF441Q8N8Z8 693 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 FAM47BQ8NA70 645 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 SLC2A12Q8TD20 617 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 PYCR2Q96C36 320 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 HS3ST6Q96QI5 342 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 ALOXE3Q9BYJ1 711 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 PARVBQ9HBI1 364 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 YAE1D1Q9NRH1 226 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 CNOT11Q9UKZ1 510 aaKnown RBP16.6■□□□□ 0.25
CLN6-212ENST00000636020 SLC6A5Q9Y345 797 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 PCDHA13Q9Y5I0 950 aa16.6■□□□□ 0.25
CLN6-212ENST00000636020 CHCHD2Q9Y6H1 151 aaPredicted RBP16.6■□□□□ 0.25
CLN6-212ENST00000636020 EIF3FO00303 357 aaPredicted RBP16.59■□□□□ 0.25
CLN6-212ENST00000636020 CTNSO60931 367 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 ACSL3O95573 720 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 TP53P04637 393 aaPredicted RBP16.59■□□□□ 0.25
CLN6-212ENST00000636020 C8GP07360 202 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 CRYGSP22914 178 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 SLCO1A2P46721 670 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 REEP5Q00765 189 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 CSHL1Q14406 222 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 CHRFAM7AQ494W8 412 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 NHSL2Q5HYW2 709 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 PLEKHM3Q6ZWE6 761 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 OR56A3Q8NH54 315 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 ZPLD1Q8TCW7 415 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 NEIL2Q969S2 332 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 SPACA9Q96E40 222 aaPredicted RBP16.59■□□□□ 0.25
CLN6-212ENST00000636020 PIGQQ9BRB3 760 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 UGT2B28Q9BY64 529 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 HOMER3Q9NSC5 361 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 SYBUQ9NX95 663 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 KLHL28Q9NXS3 571 aa16.59■□□□□ 0.25
CLN6-212ENST00000636020 MRPS33Q9Y291 106 aaKnown RBP16.59■□□□□ 0.25
CLN6-212ENST00000636020 MED12Q93074 2177 aa16.58■□□□□ 0.25
CLN6-212ENST00000636020 A0A0G2JN53 185 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 C17orf105B2RV13 164 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 CYR61O00622 381 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 CD5LO43866 347 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 TRIM3O75382 744 aaPredicted RBP16.58■□□□□ 0.24
CLN6-212ENST00000636020 TRAPPC6AO75865 159 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 HPNP05981 417 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 TPM3P06753 285 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 MGAT1P26572 445 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 LOXP28300 417 aaPredicted RBP16.58■□□□□ 0.24
CLN6-212ENST00000636020 CDK9P50750 372 aaKnown RBP16.58■□□□□ 0.24
CLN6-212ENST00000636020 DCST1Q5T197 706 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 DUPD1Q68J44 220 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 FAM13CQ8NE31 585 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 OR10G3Q8NGC4 313 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 NUBPLQ8TB37 319 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 SLC22A8Q8TCC7 542 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 ZNF721Q8TF20 911 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 SLC44A1Q8WWI5 657 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 SLC5A11Q8WWX8 675 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 FAR2Q96K12 515 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 MARK4Q96L34 752 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 ZFP3Q96NJ6 502 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 DOHHQ9BU89 302 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 CCDC68Q9H2F9 335 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 PIGMQ9H3S5 423 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 EIF2B3Q9NR50 452 aaKnown RBP16.58■□□□□ 0.24
CLN6-212ENST00000636020 ZNF226Q9NYT6 803 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 SOX13Q9UN79 622 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 CR1P17927 2039 aa16.58■□□□□ 0.24
CLN6-212ENST00000636020 RCBTB2O95199 551 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 LRATO95237 230 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 ETHE1O95571 254 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 TPM1P09493 284 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 FAM157CP0CG43 387 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 TNNI3P19429 210 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 SAT1P21673 171 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 SOX18P35713 384 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 PCYT1AP49585 367 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 ATP5J2P56134 94 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 FAM27E3Q08E93 113 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 SP140Q13342 867 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 RCAN2Q14206 197 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 RBBP5Q15291 538 aaKnown RBP16.57■□□□□ 0.24
CLN6-212ENST00000636020 WIPI1Q5MNZ9 446 aaPredicted RBP16.57■□□□□ 0.24
CLN6-212ENST00000636020 SLC15A4Q8N697 577 aa16.57■□□□□ 0.24
CLN6-212ENST00000636020 GABPB2Q8TAK5 448 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms