RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 HSPA12AO43301 675 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 PRAMEF2O60811 474 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 MITFO75030 526 aaPredicted RBP8.57□□□□□ -1.04
VCL-206ENST00000623461 UBXN7O94888 489 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 SCGB1D2O95969 90 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 UCHL1P09936 223 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 CD8BP10966 210 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 SRCP12931 536 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 HTR1BP28222 390 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 IGFALSP35858 605 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 OR1E2P47887 323 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 WNT4P56705 351 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 ZNF763Q0D2J5 394 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 GRIN2CQ14957 1233 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 MICAQ29983 383 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 GLT8D1Q68CQ7 371 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 ELP2Q6IA86 826 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 GLIS2Q9BZE0 524 aaPredicted RBP8.57□□□□□ -1.04
VCL-206ENST00000623461 NAA50Q9GZZ1 169 aaKnown RBP8.57□□□□□ -1.04
VCL-206ENST00000623461 HEBP1Q9NRV9 189 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 FBXW2Q9UKT8 454 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 SLC22A14Q9Y267 594 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 OSMP13725 252 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 RGS6P49758 472 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 CCR8P51685 355 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 MRPS10P82664 201 aaKnown RBP8.57□□□□□ -1.04
VCL-206ENST00000623461 CYCSP99999 105 aaKnown RBP8.57□□□□□ -1.04
VCL-206ENST00000623461 MC1RQ01726 317 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 OLIG2Q13516 323 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 B3GNT8Q7Z7M8 397 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 WDSUB1Q8N9V3 476 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 PROKR2Q8NFJ6 384 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 RAB11FIP5Q9BXF6 653 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 DCAF13Q9NV06 445 aaKnown RBP8.57□□□□□ -1.04
VCL-206ENST00000623461 CFAP97Q9P2B7 532 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 COLEC10Q9Y6Z7 277 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 KLK1P06870 262 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 CD79BP40259 229 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 AGTR2P50052 363 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 HK3P52790 923 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 CBFBQ13951 182 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 GXYLT1Q4G148 440 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 LPPQ93052 612 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 SGTBQ96EQ0 304 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 ACSL6Q9UKU0 697 aa8.57□□□□□ -1.04
VCL-206ENST00000623461 WASHC1A8K0Z3 465 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 RBMXL2O75526 392 aaKnown RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 ZNF26P17031 533 aaPredicted RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 OXTRP30559 389 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 NUDT1P36639 197 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SSX2Q16385 188 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 STEAP3Q658P3 488 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 ZNF584Q8IVC4 421 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 RGL4Q8IZJ4 473 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 DTWD1Q8N5C7 304 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 OR51G2Q8NGK0 314 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SLC22A17Q8WUG5 538 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 RAD9AQ99638 391 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SSX3Q99909 188 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 RHCGQ9UBD6 479 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 TMEM98Q9Y2Y6 226 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 HEMK1Q9Y5R4 338 aaPredicted RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 RGPD1P0DJD0 1748 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 ATP6V1G2-DDX39BF2Z307 99 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 ALDOBP05062 364 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 FDXRP22570 491 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 TMEM205Q6UW68 189 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 GSG1LQ6UXU4 331 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 CADM3Q8N126 398 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 CASTOR1Q8WTX7 329 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 KIAA1143Q96AT1 154 aaPredicted RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 C5orf34Q96MH7 638 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 NSUN5Q96P11 429 aaKnown RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 THAP7Q9BT49 309 aaPredicted RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 NANSQ9NR45 359 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 ADARB2Q9NS39 739 aaKnown RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 CCND3P30281 292 aaPredicted RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 DEFA6Q01524 100 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 TUBB3Q13509 450 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 WASH2PQ6VEQ5 465 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 LYSMD2Q8IV50 215 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 FANK1Q8TC84 345 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 ZNF514Q96K75 400 aaPredicted RBP8.56□□□□□ -1.04
VCL-206ENST00000623461 LRR1Q96L50 414 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 AP1S3Q96PC3 154 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SLC22A31A6NKX4 558 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 ARNTLO00327 626 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 GABARAPO95166 117 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 TGFB1P01137 390 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SLC35G6P0C7Q6 338 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 DPEP1P16444 411 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 MMP12P39900 470 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 ART1P52961 327 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 C1QTNF8P60827 252 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 SERINC3Q13530 473 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 LRRC37A5PQ49AS3 106 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 FOXB2Q5VYV0 432 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 TMEM220Q6QAJ8 160 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 IFNL1Q8IU54 200 aa8.56□□□□□ -1.04
VCL-206ENST00000623461 ACBD7Q8N6N7 88 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms