RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CDK16Q00536 496 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 FOLH1Q04609 750 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 SETDB1Q15047 1291 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 PAOXQ6QHF9 649 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 C4orf22Q6V702 233 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 ACAD11Q709F0 780 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 PIWIL4Q7Z3Z4 852 aaKnown RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 CLNKQ7Z7G1 428 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 TGIF2LYQ8IUE0 185 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 CPNE9Q8IYJ1 553 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 ZFP62Q8NB50 900 aaPredicted RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 FAM13CQ8NE31 585 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 OR52N2Q8NGI0 321 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 OR10Q1Q8NGQ4 319 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 C16orf52Q8NHV5 167 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 RFWD2Q8NHY2 731 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 MRRFQ96E11 262 aaKnown RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 THOC1Q96FV9 657 aaKnown RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 ZNF570Q96NI8 536 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 RAB3IPQ96QF0 476 aaPredicted RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 GPR21Q99679 349 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 FOXC2Q99958 501 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 SLC6A16Q9GZN6 736 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 ATG10Q9H0Y0 220 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 CCM2LQ9NUG4 571 aaPredicted RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 MKS1Q9NXB0 559 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 NOP53Q9NZM5 478 aaKnown RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 KLHL42Q9P2K6 505 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 NKX1-2Q9UD57 310 aaPredicted RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 HAO1Q9UJM8 370 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 ZNF180Q9UJW8 692 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 SH2B3Q9UQQ2 575 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 FAM237BA0A1B0GVD1 139 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 HMX2A2RU54 273 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 NPIPA2E9PIF3 369 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 NPIPA3F8WFD2 350 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 ACOT7O00154 380 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 PSMD12O00232 456 aaPredicted RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 CHST10O43529 356 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 OR1F1O43749 312 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 GALR3O60755 368 aaPredicted RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 AVILO75366 819 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 ITGA10O75578 1167 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 DRD2P14416 443 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 ALOX12P18054 663 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 CLCN2P51788 898 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 BTG2P78543 158 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 SARNPP82979 210 aaKnown RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 MEF2AQ02078 507 aaPredicted RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 CTBP1Q13363 440 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 NAE1Q13564 534 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 THOC5Q13769 683 aaKnown RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 CEBPEQ15744 281 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 KBTBD12Q3ZCT8 623 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 NIPAL1Q6NVV3 410 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 MBOAT1Q6ZNC8 495 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 QSOX2Q6ZRP7 698 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 ABHD13Q7L211 337 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 MDGA2Q7Z553 956 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 DENND6AQ8IWF6 608 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 PALM2Q8IXS6 379 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 MFSD9Q8NBP5 474 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 MCUQ8NE86 351 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 ARMC2Q8NEN0 867 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 CD200R1Q8TD46 325 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 NINJ1Q92982 152 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 APOPT1Q96IL0 206 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 MANSC1Q9H8J5 431 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 RNPEPL1Q9HAU8 725 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 FBXO6Q9NRD1 293 aaPredicted RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 SMYD2Q9NRG4 433 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 DNAJB12Q9NXW2 375 aaKnown RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 FBXW2Q9UKT8 454 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 ERVK-11Q9UQG0 969 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 CHMP2BQ9UQN3 213 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 MED16Q9Y2X0 877 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 DHRS7Q9Y394 339 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 LRRC42Q9Y546 428 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 TRBV11-1A0A0K0K1C0 115 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 PABPN1LA6NDY0 278 aaKnown RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 FIGNL2A6NMB9 653 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 A8MUA0 341 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 A8MVJ9 347 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 CXorf49A8MYA2 514 aaPredicted RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 GOLGA8RI6L899 631 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 MYO1DO94832 1006 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 B3GALT4O96024 378 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 GSTA2P09210 222 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 ZNF888P0CJ79 500 aaPredicted RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 CCR8P51685 355 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 NUP107P57740 925 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 PLGLB1Q02325 96 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 RGS1Q08116 209 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 HYAL2Q12891 473 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 PWP1Q13610 501 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 KRT72Q14CN4 511 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 LRRC8EQ6NSJ5 796 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 ZNF549Q6P9A3 640 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 AGTRAPQ6RW13 159 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 CYHR1Q6ZMK1 362 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms