RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 SLC22A18Q96BI1 424 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 MTERF3Q96E29 417 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 MSANTD3Q96H12 275 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 KCNC2Q96PR1 638 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 YIPF4Q9BSR8 244 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 GRIP2Q9C0E4 1043 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 SLAMF7Q9NQ25 335 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 SLC2A4RGQ9NR83 387 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 KIF17Q9P2E2 1029 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 MRPS17Q9Y2R5 130 aaKnown RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 ORC6Q9Y5N6 252 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 C4orf51C9J302 202 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 C9P02748 559 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 ZNF888P0CJ79 500 aaPredicted RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 NTSP30990 170 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 OR1E2P47887 323 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 EIF2B2P49770 351 aaKnown RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 CDK9P50750 372 aaKnown RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 STXBP1P61764 594 aaKnown RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 RPL6Q02878 288 aaKnown RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 CD300CQ08708 224 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 EIF2B5Q13144 721 aaKnown RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 C18orf63Q68DL7 685 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 TMEM26Q6ZUK4 368 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 PEX5LQ8IYB4 626 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 SYNPOQ8N3V7 929 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 ZCCHC7Q8N3Z6 543 aaKnown RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 OR52N2Q8NGI0 321 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 COL26A1Q96A83 441 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 MS4A6EQ96DS6 147 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 RMND5BQ96G75 393 aaPredicted RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 PITHD1Q9GZP4 211 aaPredicted RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 NT5DC2Q9H857 520 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 SYNPO2LQ9H987 977 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 SIRT5Q9NXA8 310 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 ENTPD4Q9Y227 616 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 PRR19A6NJB7 356 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 FOXD2O60548 495 aaPredicted RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 CLPTM1O96005 669 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 SLC35G6P0C7Q6 338 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 DDX5P17844 614 aaKnown RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 POU3F3P20264 500 aaPredicted RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 HIST1H1TP22492 207 aaPredicted RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 ARHGDIAP52565 204 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 OLR1P78380 273 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 CDK6Q00534 326 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 DEFB134Q4QY38 66 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 TMEM35AQ53FP2 167 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 RPS26P11Q5JNZ5 115 aaPredicted RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 ABI3BPQ7Z7G0 1075 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 ASPGQ86U10 573 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 ZBED6CLQ96FA7 236 aaPredicted RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 CDX2Q99626 313 aaPredicted RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 AICDAQ9GZX7 198 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 ING2Q9H160 280 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 SAMHD1Q9Y3Z3 626 aaKnown RBP9.43□□□□□ -0.9
VTA1-205ENST00000620996 ATG4BQ9Y4P1 393 aa9.43□□□□□ -0.9
VTA1-205ENST00000620996 HEATR5BQ9P2D3 2071 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 A0A1W2PPC4 97 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 KRBA1A5PL33 1030 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 PGRMC2O15173 223 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 CAPNS1P04632 268 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 BCHEP06276 602 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 THRBP10828 461 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 CYP4B1P13584 511 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 PORP16435 677 aaPredicted RBP9.42□□□□□ -0.9
VTA1-205ENST00000620996 UQCRC2P22695 453 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 ALDH3A2P51648 485 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 DSTNP60981 165 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 TGM3Q08188 693 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 DCTN2Q13561 401 aaKnown RBP9.42□□□□□ -0.9
VTA1-205ENST00000620996 FZD2Q14332 565 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 ABHD17CQ6PCB6 329 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 HMGN2P46Q86SG4 172 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 CCDC116Q8IYX3 515 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 MFSD9Q8NBP5 474 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 OR2L5Q8NG80 312 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 GIPC3Q8TF64 312 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 OR5P2Q8WZ92 322 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 TFAP2CQ92754 450 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 CCDC3Q9BQI4 270 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 LIN28AQ9H9Z2 209 aaKnown RBP9.42□□□□□ -0.9
VTA1-205ENST00000620996 EQTNQ9NQ60 294 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 ZCCHC3Q9NUD5 404 aaKnown RBP9.42□□□□□ -0.9
VTA1-205ENST00000620996 DUSP12Q9UNI6 340 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 MYRFQ9Y2G1 1151 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 AP1M2Q9Y6Q5 423 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 TDRD6O60522 2096 aaKnown RBP9.42□□□□□ -0.9
VTA1-205ENST00000620996 IGHV1OR15-9A0A0B4J2B8 117 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 SPTY2D1-AS1A0A0U1RR47 76 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 A6NL46 340 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 H0YJX3 145 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 M0QX08 132 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 SDC3O75056 442 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 ZNF217O75362 1048 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 IL1RNP18510 177 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 ATP5A1P25705 553 aaKnown RBP9.42□□□□□ -0.9
VTA1-205ENST00000620996 PCGF2P35227 344 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 CAPGP40121 348 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 CCR5P51681 352 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms