RNA–Protein interactions for RNA: ENST00000620581.4

GRIA3-208, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-208ENST00000620581 OR14A16Q8NHC5 309 aa12.65□□□□□ -0.38
GRIA3-208ENST00000620581 SH3GL1Q99961 368 aa12.65□□□□□ -0.38
GRIA3-208ENST00000620581 ZNF700Q9H0M5 742 aa12.65□□□□□ -0.38
GRIA3-208ENST00000620581 SLC35C2Q9NQQ7 365 aa12.65□□□□□ -0.38
GRIA3-208ENST00000620581 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.65□□□□□ -0.38
GRIA3-208ENST00000620581 DCTN4Q9UJW0 460 aa12.65□□□□□ -0.38
GRIA3-208ENST00000620581 MSRB2Q9Y3D2 182 aa12.65□□□□□ -0.38
GRIA3-208ENST00000620581 A0A1W2PNU3 283 aaPredicted RBP12.64□□□□□ -0.39
GRIA3-208ENST00000620581 C9orf172C9J069 976 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 NRP2O60462 931 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 KITP10721 976 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 COX4I1P13073 169 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 KIR3DL1P43629 444 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 RASSF2P50749 326 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 NKAIN1Q4KMZ8 207 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 CPTPQ5TA50 214 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 NDUFAF5Q5TEU4 345 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 ST13P4Q8IZP2 240 aaPredicted RBP12.64□□□□□ -0.39
GRIA3-208ENST00000620581 N4BP2L2Q92802 583 aaPredicted RBP12.64□□□□□ -0.39
GRIA3-208ENST00000620581 PPCDCQ96CD2 204 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 FAM122AQ96E09 287 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 NSL1Q96IY1 281 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 RILPQ96NA2 401 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 DPH1Q9BZG8 443 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 SLC22A11Q9NSA0 550 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 GID8Q9NWU2 228 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 C19orf25Q9UFG5 118 aaPredicted RBP12.64□□□□□ -0.39
GRIA3-208ENST00000620581 PTGDR2Q9Y5Y4 395 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 EXPH5Q8NEV8 1989 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 AGR2O95994 175 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 IL3P08700 152 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 CERS1P27544 350 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 IL12AP29459 219 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 TSTA3Q13630 321 aaPredicted RBP12.64□□□□□ -0.39
GRIA3-208ENST00000620581 TMEM81Q6P7N7 255 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 ALYREFQ86V81 257 aaKnown RBP12.64□□□□□ -0.39
GRIA3-208ENST00000620581 TMEM126BQ8IUX1 230 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 FITM2Q8N6M3 262 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 SPDL1Q96EA4 605 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 TRIM4Q9C037 500 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 ADAP2Q9NPF8 381 aa12.64□□□□□ -0.39
GRIA3-208ENST00000620581 MRPS2Q9Y399 296 aaKnown RBP12.64□□□□□ -0.39
GRIA3-208ENST00000620581 PDPK1O15530 556 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 MYF5P13349 255 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 NTSP30990 170 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 DIO3P55073 304 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 TAS2R50P59544 299 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 FUT7Q11130 342 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 FADDQ13158 208 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 CYLC2Q14093 348 aaPredicted RBP12.63□□□□□ -0.39
GRIA3-208ENST00000620581 TRMT5Q32P41 509 aaKnown RBP12.63□□□□□ -0.39
GRIA3-208ENST00000620581 ZNF628Q5EBL2 1059 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 BHLHB9Q6PI77 547 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 MTDHQ86UE4 582 aaKnown RBP12.63□□□□□ -0.39
GRIA3-208ENST00000620581 OR4K14Q8NGD5 310 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 OR56A1Q8NGH5 318 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 OR51Q1Q8NH59 317 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 NCLNQ969V3 563 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 NTNG2Q96CW9 530 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 MAPKAP1Q9BPZ7 522 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 DUSP26Q9BV47 211 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 CAPNS1P04632 268 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 PGRP06401 933 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 LIPCP11150 499 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 CPN2P22792 545 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 DCAF7P61962 342 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 NCF4Q15080 339 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 DNAL1Q4LDG9 190 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 MYLK4Q86YV6 388 aaPredicted RBP12.63□□□□□ -0.39
GRIA3-208ENST00000620581 OR2L13Q8N349 312 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 PAIP1Q9H074 479 aaKnown RBP12.63□□□□□ -0.39
GRIA3-208ENST00000620581 FAM107BQ9H098 131 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 LRMDAQ9H2I8 198 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 SATB2Q9UPW6 733 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 KLHL20Q9Y2M5 609 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 TRIOO75962 3097 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 ASCC3Q8N3C0 2202 aaKnown RBP12.63□□□□□ -0.39
GRIA3-208ENST00000620581 ASPDHA6ND91 283 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 GABRR3A8MPY1 467 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 C9J4A7 227 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 AK1P00568 194 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 UQCRC2P22695 453 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 S100A3P33764 101 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 ANXA11P50995 505 aaKnown RBP12.63□□□□□ -0.39
GRIA3-208ENST00000620581 SIM1P81133 766 aaPredicted RBP12.63□□□□□ -0.39
GRIA3-208ENST00000620581 ELAVL1Q15717 326 aaKnown RBP12.63□□□□□ -0.39
GRIA3-208ENST00000620581 ZSWIM7Q19AV6 140 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 SAXO2Q658L1 398 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 C16orf89Q6UX73 402 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 FAM20CQ8IXL6 584 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 GPALPP1Q8IXQ4 340 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 OR2Y1Q8NGV0 311 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 GTF2H4Q92759 462 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 SLC35B4Q969S0 331 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 CATSPER2Q96P56 530 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 LMF2Q9BU23 707 aaKnown RBP12.63□□□□□ -0.39
GRIA3-208ENST00000620581 RPF2Q9H7B2 306 aaKnown RBP12.63□□□□□ -0.39
GRIA3-208ENST00000620581 EFCAB1Q9HAE3 211 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 ATG4BQ9Y4P1 393 aa12.63□□□□□ -0.39
GRIA3-208ENST00000620581 RP1P56715 2156 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms