RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 SYT5O00445 386 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 DCTN3O75935 186 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 HPNP05981 417 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 LYNP07948 512 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 CALB2P22676 271 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 PRDX3P30048 256 aaKnown RBP5.08□□□□□ -1.6
CBWD3-215ENST00000619322 MLF1P58340 268 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 HERC3Q15034 1050 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 MEP1AQ16819 746 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 AGAP7PQ5VUJ5 663 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 RWDD4Q6NW29 188 aaKnown RBP5.08□□□□□ -1.6
CBWD3-215ENST00000619322 CYHR1Q6ZMK1 362 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 ZNF554Q86TJ5 538 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 SLC38A6Q8IZM9 456 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 GALNT16Q8N428 558 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 GOT1L1Q8NHS2 421 aaPredicted RBP5.08□□□□□ -1.6
CBWD3-215ENST00000619322 RFWD2Q8NHY2 731 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 ASZ1Q8WWH4 475 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 RAD51AP1Q96B01 352 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 CXorf40BQ96DE9 158 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 CCDC138Q96M89 665 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 ZNF778Q96MU6 729 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 BIRC8Q96P09 236 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 AGAP4Q96P64 663 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 NUDT9Q9BW91 350 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 TBC1D10AQ9BXI6 508 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 C20orf27Q9GZN8 174 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 VCXQ9H320 206 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 RNPEPL1Q9HAU8 725 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 ARMCX1Q9P291 453 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 CA5BQ9Y2D0 317 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 CUL9Q8IWT3 2517 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 ITPR1Q14643 2758 aa5.08□□□□□ -1.6
CBWD3-215ENST00000619322 ADAM10O14672 748 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 GRAP2O75791 330 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 POP7O75817 140 aaKnown RBP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 CNOT4O95628 575 aaKnown RBP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 MAGP20916 626 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 UGT1A4P22310 534 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 CHMP24386 653 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 MSX2P35548 267 aaPredicted RBP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 GRIA3P42263 894 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 MRPL19P49406 292 aaKnown RBP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 HSD17B7P56937 341 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 PDK3Q15120 406 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 SMU1Q2TAY7 513 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 ARHGAP40Q5TG30 622 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 LSRQ86X29 649 aaPredicted RBP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 FAM129CQ86XR2 697 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 DEFB119Q8N690 84 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 ZNF366Q8N895 744 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 OR7G1Q8NGA0 311 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 GIPC3Q8TF64 312 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 ASB11Q8WXH4 323 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 CCDC124Q96CT7 223 aaKnown RBP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 CDKN2AIPNLQ96HQ2 116 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 OR6C1Q96RD1 312 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 WRAP53Q9BUR4 548 aaKnown RBP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 CCDC106Q9BWC9 280 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 WWP1Q9H0M0 922 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 TPK1Q9H3S4 243 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 MANSC1Q9H8J5 431 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 UGT1A10Q9HAW8 530 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 IL1RL2Q9HB29 575 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 TXLNGQ9NUQ3 528 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 TMEM9Q9P0T7 183 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 POU2F3Q9UKI9 436 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 DHRS7Q9Y394 339 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 CLDN16Q9Y5I7 305 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 ZCWPW2A0A1B0GU75 182 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 B4DGG1 531 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 POC1B-GALNT4F8VUJ3 575 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 SHOXO15266 292 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 IFNB1P01574 187 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 ARRB2P32121 409 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 GRIA1P42261 906 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 ENTPD1P49961 510 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 YBX1P67809 324 aaKnown RBP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 BASP1P80723 227 aaKnown RBP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 PRKAA1Q13131 559 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 THOC5Q13769 683 aaKnown RBP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 INSCQ1MX18 579 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 TRMT10BQ6PF06 316 aaKnown RBP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 MAVSQ7Z434 540 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 GLT6D1Q7Z4J2 308 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 GDF7Q7Z4P5 450 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 POU5F2Q8N7G0 328 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 PDPRQ8NCN5 879 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 OR2L3Q8NG85 312 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 CCDC110Q8TBZ0 833 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 ZPLD1Q8TCW7 415 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 PMM1Q92871 262 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 AHCYL2Q96HN2 611 aaKnown RBP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 SLC39A3Q9BRY0 314 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 TM6SF2Q9BZW4 377 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 OR2B2Q9GZK3 357 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 SIK2Q9H0K1 926 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 NT5MQ9NPB1 228 aa5.07□□□□□ -1.6
CBWD3-215ENST00000619322 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.07□□□□□ -1.6
CBWD3-215ENST00000619322 ZNF639Q9UID6 485 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms