RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 LRIT2A6NDA9 550 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 TGFBR3LH3BV60 316 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 GOSR1O95249 250 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 HOXC12P31275 282 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 TRPC1P48995 793 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 HNRNPFP52597 415 aaKnown RBP16■□□□□ 0.15
CHMP4A-211ENST00000609024 MTTPP55157 894 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 TIAL1Q01085 375 aaKnown RBP eCLIP16■□□□□ 0.15
CHMP4A-211ENST00000609024 ASPHQ12797 758 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 FBXL19-AS1Q494R0 122 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 CTAGE6Q86UF2 777 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 LACC1Q8IV20 430 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 P3H2Q8IVL5 708 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 TMEM52Q8NDY8 209 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 NEIL3Q8TAT5 605 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 PTPMT1Q8WUK0 201 aaPredicted RBP16■□□□□ 0.15
CHMP4A-211ENST00000609024 SLC6A15Q9H2J7 730 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 QPCTLQ9NXS2 382 aa16■□□□□ 0.15
CHMP4A-211ENST00000609024 ARHGAP21Q5T5U3 1957 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 CLCA1A8K7I4 914 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 EEF1E1-BLOC1S5C9J1V9 151 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 EEF1E1O43324 174 aaKnown RBP15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 WDR47O94967 919 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 EPPINO95925 133 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 CCDC175P0C221 793 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 C1GALT1C1LP0DN25 315 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 PGAM1P18669 254 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 ENDOUP21128 410 aaKnown RBP15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 GDF1P27539 372 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 LIM2P55344 173 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 SLBPQ14493 270 aaKnown RBP eCLIP15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 MPEG1Q2M385 716 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 PRAMEF20Q5VT98 475 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 FRA10AC1Q70Z53 315 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 PM20D2Q8IYS1 436 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 FAM13CQ8NE31 585 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 TNIP2Q8NFZ5 429 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 OR2L5Q8NG80 312 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 LINC01560Q8TB33 94 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 ZNF703Q9H7S9 590 aaPredicted RBP15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 ACKR4Q9NPB9 350 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 DAPP1Q9UN19 280 aa15.99■□□□□ 0.15
CHMP4A-211ENST00000609024 EML6Q6ZMW3 1958 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 DNHD1Q96M86 4753 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 CLEC3AO75596 197 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 TRAPPC6AO75865 159 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 TTC4O95801 387 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 AHSGP02765 367 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 CERS1P27544 350 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 HNRNPH1P31943 449 aaKnown RBP15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 TIMP3P35625 211 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 MSH2P43246 934 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 HNMTP50135 292 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 CRYMQ14894 314 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 PIGGQ5H8A4 983 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 FAM45BPQ6NSW5 357 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 DND1Q8IYX4 353 aaKnown RBP15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 ZNF321PQ8N8H1 164 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 FAM45AQ8TCE6 357 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 SIGLEC10Q96LC7 697 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 CSF3RQ99062 836 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 ROGDIQ9GZN7 287 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 CNIH4Q9P003 139 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 VWA7Q9Y334 891 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 CLDN16Q9Y5I7 305 aa15.98■□□□□ 0.15
CHMP4A-211ENST00000609024 HRNRQ86YZ3 2850 aaPredicted RBP15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 CYR61O00622 381 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 CASKO14936 926 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 LDB3O75112 727 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 RFPL3SP0C7P2 107 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 PCSK6P29122 969 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 CEACAM8P31997 349 aaPredicted RBP15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 RPL21P46778 160 aaKnown RBP15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 PPP2R2BQ00005 443 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 SORDQ00796 357 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 POU4F3Q15319 338 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 ACSF3Q4G176 576 aaPredicted RBP15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 TMEM139Q8IV31 216 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 SLC15A4Q8N697 577 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 NAXEQ8NCW5 288 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 NUBPLQ8TB37 319 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 MAGOHBQ96A72 148 aaKnown RBP15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 SPACA9Q96E40 222 aaPredicted RBP15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 ARSGQ96EG1 525 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 RBM18Q96H35 190 aaKnown RBP15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 ART5Q96L15 291 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 DGAT2Q96PD7 388 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 DOHHQ9BU89 302 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 CAPS2Q9BXY5 557 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 AICDAQ9GZX7 198 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 EPB41L4BQ9H329 900 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 PLEKHF2Q9H8W4 249 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 CORO1CQ9ULV4 474 aaPredicted RBP15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 CAMK2AQ9UQM7 478 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 VPS13CQ709C8 3753 aa15.97■□□□□ 0.15
CHMP4A-211ENST00000609024 NSD1Q96L73 2696 aaPredicted RBP15.96■□□□□ 0.15
CHMP4A-211ENST00000609024 CLGNO14967 610 aa15.96■□□□□ 0.15
CHMP4A-211ENST00000609024 LY6G6DO95868 133 aa15.96■□□□□ 0.15
CHMP4A-211ENST00000609024 SERPINB3P29508 390 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms