RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 A0A1W2PRU2 124 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 HMX3A6NHT5 357 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 H3BM21 787 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 M0R129 80 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 TGFB1P01137 390 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 DNTTP04053 509 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 GBAP04062 536 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 PDHA2P29803 388 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 TIE1P35590 1138 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 SLC15A1P46059 708 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 TAS2R50P59544 299 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 GANABQ14697 944 aaKnown RBP13.99□□□□□ -0.17
CTCFL-219ENST00000608720 SNAP47Q5SQN1 464 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 KLHL17Q6TDP4 642 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 IDO2Q6ZQW0 420 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 TECPR1Q7Z6L1 1165 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 GALNT6Q8NCL4 622 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 WDR36Q8NI36 951 aaKnown RBP13.99□□□□□ -0.17
CTCFL-219ENST00000608720 WDR48Q8TAF3 677 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 CEP19Q96LK0 163 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 SLC46A2Q9BY10 475 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 SMG9Q9H0W8 520 aaKnown RBP13.99□□□□□ -0.17
CTCFL-219ENST00000608720 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.99□□□□□ -0.17
CTCFL-219ENST00000608720 TAS2R16Q9NYV7 291 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 OGDHLQ9ULD0 1010 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 SLC6A14Q9UN76 642 aa13.99□□□□□ -0.17
CTCFL-219ENST00000608720 TSPAN11A1L157 253 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 ZSCAN5BA6NJL1 495 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 ARHGAP33O14559 1287 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 LEFTY1O75610 366 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 LRG1P02750 347 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 GJA1P17302 382 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 MAGP20916 626 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 CD72P21854 359 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 XPAP23025 273 aaPredicted RBP13.98□□□□□ -0.17
CTCFL-219ENST00000608720 CNR2P34972 360 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 RPS5P46782 204 aaKnown RBP13.98□□□□□ -0.17
CTCFL-219ENST00000608720 LBX1P52954 281 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 TBPL1P62380 186 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 CDONQ4KMG0 1287 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 ARSIQ5FYB1 569 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.98□□□□□ -0.17
CTCFL-219ENST00000608720 FAM92BQ6ZTR7 304 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 GRAMD2AQ8IUY3 354 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 TAGAPQ8N103 731 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 SIX5Q8N196 739 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 OR5AK3PQ8NH89 298 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 MARVELD3Q96A59 401 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 TMCO6Q96DC7 493 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 TAPBPLQ9BX59 468 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 OR51B5Q9H339 312 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 NMNAT1Q9HAN9 279 aaPredicted RBP13.98□□□□□ -0.17
CTCFL-219ENST00000608720 RC3H2Q9HBD1 1191 aaKnown RBP13.98□□□□□ -0.17
CTCFL-219ENST00000608720 C3orf14Q9HBI5 128 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 TRIM39Q9HCM9 518 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 GULP1Q9UBP9 304 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 KCND3Q9UK17 655 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 PIPSLA2A3N6 862 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 NEDD8-MDP1E9PL57 170 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 SAP18O00422 153 aaKnown RBP13.98□□□□□ -0.17
CTCFL-219ENST00000608720 POLR1CO15160 346 aaPredicted RBP13.98□□□□□ -0.17
CTCFL-219ENST00000608720 SHOXO15266 292 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 PQBP1O60828 265 aaKnown RBP13.98□□□□□ -0.17
CTCFL-219ENST00000608720 UGT2B17O75795 530 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 UQCRC2P22695 453 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 SOAT1P35610 550 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 DSTNP60981 165 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 RHAGQ02094 409 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 ZNF770Q6IQ21 691 aaPredicted RBP13.98□□□□□ -0.17
CTCFL-219ENST00000608720 GDPGP1Q6ZNW5 385 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 IKBIPQ70UQ0 350 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 DPPA4Q7L190 304 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 KRT73Q86Y46 540 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 LIX1LQ8IVB5 337 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 LSMEM1Q8N8F7 131 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 ZNF557Q8N988 423 aaPredicted RBP13.98□□□□□ -0.17
CTCFL-219ENST00000608720 SLC30A2Q9BRI3 323 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 SGPP1Q9BX95 441 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 ROGDIQ9GZN7 287 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 MKRN2Q9H000 416 aaKnown RBP13.98□□□□□ -0.17
CTCFL-219ENST00000608720 RACGAP1Q9H0H5 632 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 MIR1-1HGQ9H1L0 117 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 EPHX3Q9H6B9 360 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 ACOXLQ9NUZ1 547 aa13.98□□□□□ -0.17
CTCFL-219ENST00000608720 KLHL18O94889 574 aa13.97□□□□□ -0.17
CTCFL-219ENST00000608720 SEMA3DO95025 777 aa13.97□□□□□ -0.17
CTCFL-219ENST00000608720 ADAP00813 363 aa13.97□□□□□ -0.17
CTCFL-219ENST00000608720 KLK1P06870 262 aa13.97□□□□□ -0.17
CTCFL-219ENST00000608720 PBLDP30039 288 aaPredicted RBP13.97□□□□□ -0.17
CTCFL-219ENST00000608720 CSTF2P33240 577 aaKnown RBP eCLIP13.97□□□□□ -0.17
CTCFL-219ENST00000608720 SNRPGP62308 76 aaKnown RBP13.97□□□□□ -0.17
CTCFL-219ENST00000608720 TARDBPQ13148 414 aaKnown RBP eCLIP13.97□□□□□ -0.17
CTCFL-219ENST00000608720 TSTA3Q13630 321 aaPredicted RBP13.97□□□□□ -0.17
CTCFL-219ENST00000608720 SSX1Q16384 188 aa13.97□□□□□ -0.17
CTCFL-219ENST00000608720 MEDAGQ5VYS4 303 aa13.97□□□□□ -0.17
CTCFL-219ENST00000608720 REEP3Q6NUK4 255 aa13.97□□□□□ -0.17
CTCFL-219ENST00000608720 NXPE4Q6UWF7 544 aa13.97□□□□□ -0.17
CTCFL-219ENST00000608720 SLC51BQ86UW2 128 aa13.97□□□□□ -0.17
CTCFL-219ENST00000608720 ADIPOR2Q86V24 386 aa13.97□□□□□ -0.17
CTCFL-219ENST00000608720 TRIM69Q86WT6 500 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms