RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 KDM4DQ6B0I6 523 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 GALNT13Q8IUC8 556 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 CCDC116Q8IYX3 515 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 METTL4Q8N3J2 472 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 OR52N2Q8NGI0 321 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 ZCCHC10Q8TBK6 192 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 RAB2BQ8WUD1 216 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 TMEM19Q96HH6 336 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 RDH12Q96NR8 316 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 PRR14Q9BWN1 585 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 YTHDF1Q9BYJ9 559 aaKnown RBP10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 KLHL31Q9H511 634 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 CD93Q9NPY3 652 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 SPATA7Q9P0W8 599 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 CORO2BQ9UQ03 480 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 YBX2Q9Y2T7 364 aaKnown RBP10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 LYVE1Q9Y5Y7 322 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 SPTBP11277 2137 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 A0A1W2PS29 197 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 TNNI3P19429 210 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 BUD31P41223 144 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 ST13P50502 369 aaKnown RBP10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 MLLT10P55197 1068 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 TAS2R38P59533 333 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 LASP1Q14847 261 aaKnown RBP10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 EIF4HQ15056 248 aaKnown RBP10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 SHHQ15465 462 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 DEPDC1Q5TB30 811 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 FAM71E1Q6IPT2 247 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 CCDC71Q8IV32 467 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 ADGRF3Q8IZF5 1079 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 SMPDL3AQ92484 453 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 COQ8BQ96D53 544 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 NKX2-4Q9H2Z4 354 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 PHPT1Q9NRX4 125 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 SEC14L3Q9UDX4 400 aa10.98□□□□□ -0.65
ARHGEF1-220ENST00000600274 FRS3O43559 492 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 APOL3O95236 402 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 KRT75O95678 551 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 IFNW1P05000 195 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ALOX12P18054 663 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 PCGF2P35227 344 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 MAGEA2P43356 314 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 NCBP2P52298 156 aaKnown RBP eCLIP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 VEZF1Q14119 521 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 HEPACAMQ14CZ8 416 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 MAD2L1BPQ15013 274 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 SYPL1Q16563 259 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 SOWAHCQ53LP3 525 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ZNF542PQ5EBM4 170 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 C6orf120Q7Z4R8 191 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ZNF605Q86T29 641 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 PGBD3Q8N328 593 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 RAB42Q8N4Z0 105 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 OXR1Q8N573 874 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 Q8N9G6 341 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 POC5Q8NA72 575 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 LINC01555Q8NAE3 123 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ARMC5Q96C12 935 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 C7orf34Q96L11 122 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 DPEP2Q9H4A9 486 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 EXOSC4Q9NPD3 245 aaKnown RBP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 HCN2Q9UL51 889 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ADAMDEC1O15204 470 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 CLPXO76031 633 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 RPN2P04844 631 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 STSP08842 583 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 CD36P16671 472 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 UBE3AQ05086 875 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 TOP3AQ13472 1001 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 LRRC32Q14392 662 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 MOGQ16653 247 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 RNF165Q6ZSG1 346 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 MSANTD1Q6ZTZ1 278 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 P2RY8Q86VZ1 359 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ENTHD1Q8IYW4 607 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 OR5K2Q8NHB8 316 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 SP7Q8TDD2 431 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 FAR1Q8WVX9 515 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 TSACCQ96A04 125 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 MYADMQ96S97 322 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 DPH7Q9BTV6 452 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 EHD1Q9H4M9 534 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 SFXN1Q9H9B4 322 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 HMG20AQ9NP66 347 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 RNF6Q9Y252 685 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 RWDD3Q9Y3V2 267 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 PCDHGA10Q9Y5H3 936 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 DENND4CQ5VZ89 1909 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ZNF860A6NHJ4 632 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 CLDN25C9JDP6 229 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ANHXE9PGG2 379 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 M0R3H8 397 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 TBX1O43435 398 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 NARSO43776 548 aaKnown RBP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ADAM23O75077 832 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 SEC14L2O76054 403 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 MFN2O95140 757 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 DNTTP04053 509 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 CD72P21854 359 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms