RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 APLFQ8IW19 511 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 ZC3H7AQ8IWR0 971 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 DEFB119Q8N690 84 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 OR2T29Q8NH02 315 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 SLC22A18Q96BI1 424 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 SLC6A18Q96N87 628 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 KLHL25Q9H0H3 589 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 USE1Q9NZ43 259 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 CPNE7Q9UBL6 633 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 OR2A25A4D2G3 310 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 DLL1O00548 723 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 PGRMC2O15173 223 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 SUV39H1O43463 412 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 LAMTOR5O43504 91 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 CTSVO60911 334 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 CLPTM1O96005 669 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 VIPP01282 170 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 ALBP02768 609 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 DRD2P14416 443 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 UBE2IP63279 158 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 CDK6Q00534 326 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 RBBP4Q09028 425 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 C1orf61Q13536 156 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 TSEN54Q7Z6J9 526 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 SATL1Q86VE3 508 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 CAMKK1Q8N5S9 505 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 NATD1Q8N6N6 113 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 METTL25Q8N6Q8 603 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 TAMM41Q96BW9 452 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 NEURL3Q96EH8 262 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 RMND5BQ96G75 393 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 MBOAT4Q96T53 435 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 GSDMCQ9BYG8 508 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 MRPS26Q9BYN8 205 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 TOR3AQ9H497 397 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 TM9SF3Q9HD45 589 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 ADPRHL2Q9NX46 363 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 ACTR10Q9NZ32 417 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 MYRFQ9Y2G1 1151 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 CUL9Q8IWT3 2517 aa16.15■□□□□ 0.18
SHKBP1-216ENST00000598201 GSAPA4D1B5 854 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 ARAFP10398 606 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 RPS15AP62244 130 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 C18orf63Q68DL7 685 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 FCRL6Q6DN72 434 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 HORMAD2Q8N7B1 307 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 SLC37A2Q8TED4 501 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 ZBED6CLQ96FA7 236 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 RBM4BQ9BQ04 359 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 DOHHQ9BU89 302 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 RBM4Q9BWF3 364 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 GLIPR2Q9H4G4 154 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 RAD21L1Q9H4I0 556 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 NEUROD4Q9HD90 331 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 ACSS1Q9NUB1 689 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 FBXW2Q9UKT8 454 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 H0YAE9 185 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 PRAMEF10O60809 474 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 AIFM1O95831 613 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 TNFRSF1BP20333 461 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 PTGER1P34995 402 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 LSSP48449 732 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 DSTNP60981 165 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 SELENOWP63302 87 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 COL9A2Q14055 689 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 ZNF750Q32MQ0 723 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 TNFAIP8L2Q6P589 184 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 SHQ1Q6PI26 577 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 TAF8Q7Z7C8 310 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 PATL1Q86TB9 770 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 ZNF786Q8N393 782 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 TSPAN14Q8NG11 270 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 TBC1D20Q96BZ9 403 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 AMDHD1Q96NU7 426 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 AMBRA1Q9C0C7 1298 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 SLC35C2Q9NQQ7 365 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 EVA1BQ9NVM1 165 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 EHD3Q9NZN3 535 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 TMEFF2Q9UIK5 374 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 PADI4Q9UM07 663 aa16.14■□□□□ 0.17
SHKBP1-216ENST00000598201 CACNA1IQ9P0X4 2223 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 A0A1W2PS29 197 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 MYO1GB0I1T2 1018 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 K7ESF4 209 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 M0QX08 132 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 TNFSF14O43557 240 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 HS6ST1O60243 411 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 PCBP3P57721 371 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 ZNF630Q2M218 657 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 TTC33Q6PID6 262 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 CEACAM20Q6UY09 585 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 CCDC80Q76M96 950 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 PIWIL3Q7Z3Z3 882 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 C6orf120Q7Z4R8 191 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 ASPGQ86U10 573 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 ZNF761Q86XN6 746 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 HIPK1Q86Z02 1210 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 KLHDC7BQ96G42 594 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 MUS81Q96NY9 551 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 OR2A5Q96R48 311 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms