RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SLC17A7Q9P2U7 560 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 VTI1BQ9UEU0 232 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 B3GNT3Q9Y2A9 372 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 ATG4BQ9Y4P1 393 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 ASB4Q9Y574 426 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 ACTL7BQ9Y614 415 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 CLCA3PQ9Y6N3 262 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 MED13Q9UHV7 2174 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 TLN1Q9Y490 2541 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 GOLGA6L10A6NI86 522 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 TTLL8A6PVC2 850 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 CDK2AP1O14519 115 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 DYRK3O43781 588 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 TYROBPO43914 113 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 MYO1DO94832 1006 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 UROSP10746 265 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 COX7A2P14406 83 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 ALDH3A1P30838 453 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 MAPK12P53778 367 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 HNRNPH2P55795 449 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 ARG2P78540 354 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 MEP1AQ16819 746 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 BEND6Q5SZJ8 279 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 H3F3CQ6NXT2 135 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 B3GNT7Q8NFL0 401 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 ELP5Q8TE02 316 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 HAS2Q92819 552 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 RBM18Q96H35 190 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 PELOQ9BRX2 385 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 GATA5Q9BWX5 397 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 ILKAPQ9H0C8 392 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 TIMM22Q9Y584 194 aa16.17■□□□□ 0.18
SHKBP1-212ENST00000596163 KALRNO60229 2985 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 UBFD1O14562 309 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 TMPRSS11DO60235 418 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 NPHS1O60500 1241 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 LDB3O75112 727 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 NR2F6P10588 404 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 SERPINB5P36952 375 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 CLCN2P51788 898 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 TRA2BP62995 288 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 TBL3Q12788 808 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 TLR1Q15399 786 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 SPIN4Q56A73 249 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 TCHHL1Q5QJ38 904 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 ACER2Q5QJU3 275 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 SLC6A19Q695T7 634 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 Q6ZS92 163 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 COMMD6Q7Z4G1 85 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 EXOC3L1Q86VI1 746 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 LGI4Q8N135 537 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 MORN4Q8NDC4 146 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 NFAM1Q8NET5 270 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 OR14A16Q8NHC5 309 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 ANKRD9Q96BM1 317 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 VMP1Q96GC9 406 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 DGAT2Q96PD7 388 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 DEFB126Q9BYW3 111 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 RNF32Q9H0A6 362 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 ZBTB20Q9HC78 741 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 RRAGDQ9NQL2 400 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 PPIEQ9UNP9 301 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 CLDN16Q9Y5I7 305 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 BAHCC1Q9P281 2608 aa16.16■□□□□ 0.18
SHKBP1-212ENST00000596163 A0A1W2PR48 441 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 TM9SF1O15321 606 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 GPR75O95800 540 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 CHEK2O96017 543 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 GBAP04062 536 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 PLA2G2AP14555 144 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 CREB1P16220 341 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 TPP2P29144 1249 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 STT3AP46977 705 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 IGLV3-21P80748 117 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 TLE1Q04724 770 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 ACSM2AQ08AH3 577 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 GALNT1Q10472 559 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 IMPG1Q17R60 797 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 TNFAIP8L3Q5GJ75 292 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 B3GNTL1Q67FW5 361 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 ACSM2BQ68CK6 577 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 C18orf63Q68DL7 685 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 OR52E8Q6IFG1 317 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 RPS19BP1Q86WX3 136 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 C1orf52Q8N6N3 182 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 PPP1R14CQ8TAE6 165 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 SUN3Q8TAQ9 357 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 CHTF18Q8WVB6 975 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 KCNA7Q96RP8 456 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 HBEGFQ99075 208 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 FAIM2Q9BWQ8 316 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 EPN3Q9H201 632 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 KCNK9Q9NPC2 374 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 MCM8Q9UJA3 840 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 PSME2Q9UL46 239 aa16.15■□□□□ 0.18
SHKBP1-212ENST00000596163 NUP210LQ5VU65 1888 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 C1orf226A1L170 272 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 TGFBR3LH3BV60 316 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 J3QKU1 62 aa16.14■□□□□ 0.17
SHKBP1-212ENST00000596163 AZIN1O14977 448 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms