RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 COQ5Q5HYK3 327 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 LETMD1Q6P1Q0 360 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 GK5Q6ZS86 529 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 LRRC70Q7Z2Q7 622 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 DDIASQ8IXT1 998 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 FBXW8Q8N3Y1 598 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 BEND7Q8N7W2 519 aaPredicted RBP12.12□□□□□ -0.47
SCAF1-202ENST00000595242 OR4F6Q8NGB9 312 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 OR52B6Q8NGF0 335 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 NAT14Q8WUY8 206 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 ESAMQ96AP7 390 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 CLPTM1LQ96KA5 538 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 ANKRD27Q96NW4 1050 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 SERPINI1Q99574 410 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 SRMSQ9H3Y6 488 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 NOL11Q9H8H0 719 aaKnown RBP12.12□□□□□ -0.47
SCAF1-202ENST00000595242 PARVBQ9HBI1 364 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 FAM60AQ9NP50 221 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 AIG1Q9NVV5 245 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 PLA2G3Q9NZ20 509 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 WWOXQ9NZC7 414 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 STX18Q9P2W9 335 aaKnown RBP12.12□□□□□ -0.47
SCAF1-202ENST00000595242 OPTCQ9UBM4 332 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 TNFRSF10DQ9UBN6 386 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 NKX1-2Q9UD57 310 aaPredicted RBP12.12□□□□□ -0.47
SCAF1-202ENST00000595242 PDE10AQ9Y233 779 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 HS3ST3B1Q9Y662 390 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 DNMT3AQ9Y6K1 912 aaPredicted RBP12.12□□□□□ -0.47
SCAF1-202ENST00000595242 COLEC10Q9Y6Z7 277 aa12.12□□□□□ -0.47
SCAF1-202ENST00000595242 SCN2AQ99250 2005 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 ATP6AP2A0A1C7CYW4 349 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 SLC5A10A0PJK1 596 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 BTN3A3O00478 584 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 FBP2O00757 339 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 AIM2O14862 343 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 ZSCAN9O15535 394 aaPredicted RBP12.11□□□□□ -0.47
SCAF1-202ENST00000595242 HCRTR1O43613 425 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 ATP6AP2O75787 350 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 RASAL1O95294 804 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 HSPA7P48741 367 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 ERVK-8P63133 956 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 GRB7Q14451 532 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 DEFB110Q30KQ9 67 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 C18orf21Q32NC0 220 aaPredicted RBP12.11□□□□□ -0.47
SCAF1-202ENST00000595242 PDCD4Q53EL6 469 aaKnown RBP12.11□□□□□ -0.47
SCAF1-202ENST00000595242 AGKQ53H12 422 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 PIGGQ5H8A4 983 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 C1orf146Q5VVC0 180 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 REP15Q6BDI9 236 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 TMEM220Q6QAJ8 160 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 UBE2R2Q712K3 238 aaPredicted RBP12.11□□□□□ -0.47
SCAF1-202ENST00000595242 FUNDC1Q8IVP5 155 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCAF1-202ENST00000595242 MIER2Q8N344 545 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 ZNF655Q8N720 491 aaPredicted RBP12.11□□□□□ -0.47
SCAF1-202ENST00000595242 OR2T11Q8NH01 316 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 DNAJB8Q8NHS0 232 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 ASZ1Q8WWH4 475 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 LCN9Q8WX39 176 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 NRGNQ92686 78 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 STMN2Q93045 179 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 TUBGCP3Q96CW5 907 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 MDFIQ99750 246 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 EGFL8Q99944 293 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 FOXC2Q99958 501 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 TREX2Q9BQ50 279 aaPredicted RBP12.11□□□□□ -0.47
SCAF1-202ENST00000595242 TRIM54Q9BYV2 358 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 CXXC4Q9H2H0 198 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 IPPKQ9H8X2 491 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 WDR41Q9HAD4 459 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 SLC22A11Q9NSA0 550 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 ACSL5Q9ULC5 683 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 POMPQ9Y244 141 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 MEMO1Q9Y316 297 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 L3MBTL1Q9Y468 752 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 TIMM22Q9Y584 194 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 GPR45Q9Y5Y3 372 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 PTGDR2Q9Y5Y4 395 aa12.11□□□□□ -0.47
SCAF1-202ENST00000595242 SERTM1A2A2V5 107 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 NPIPB8E9PQR5 432 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 PSIP1O75475 530 aaKnown RBP12.1□□□□□ -0.47
SCAF1-202ENST00000595242 STK16O75716 305 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 KRT36O76013 467 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 GUCA1CO95843 209 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 CTSBP07858 339 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 SLC35G4P0C7Q5 338 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 LINC00032P0C843 101 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 NDUFS1P28331 727 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 HTR6P50406 440 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 LTBQ06643 244 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 FOXD4Q12950 439 aaPredicted RBP12.1□□□□□ -0.47
SCAF1-202ENST00000595242 RCN1Q15293 331 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 FAM219BQ5XKK7 198 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 Q6ZSR9 355 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 DET1Q7L5Y6 550 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 VRK3Q8IV63 474 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 CDYL2Q8N8U2 506 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 FBXO15Q8NCQ5 510 aaPredicted RBP12.1□□□□□ -0.47
SCAF1-202ENST00000595242 OR11G2Q8NGC1 345 aa12.1□□□□□ -0.47
SCAF1-202ENST00000595242 ELMO1Q92556 727 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms