RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SLC18A2Q05940 514 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 BIKQ13323 160 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 ZNF169Q14929 603 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-227ENST00000591849 ACER2Q5QJU3 275 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 IGFL2Q6UWQ7 119 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 Q6ZS92 163 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 RPS19BP1Q86WX3 136 aaKnown RBP9.43□□□□□ -0.9
BRCA1-227ENST00000591849 SCUBE1Q8IWY4 988 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 OR4N5Q8IXE1 308 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 TMEM52Q8NDY8 209 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 CATSPER1Q8NEC5 780 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 PSMF1Q92530 271 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 HAS2Q92819 552 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 TANKQ92844 425 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 L3HYPDHQ96EM0 354 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 RBM18Q96H35 190 aaKnown RBP9.43□□□□□ -0.9
BRCA1-227ENST00000591849 APOPT1Q96IL0 206 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 DGAT2Q96PD7 388 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 ZNF382Q96SR6 550 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 UTP23Q9BRU9 249 aaKnown RBP9.43□□□□□ -0.9
BRCA1-227ENST00000591849 MRPL1Q9BYD6 325 aaKnown RBP9.43□□□□□ -0.9
BRCA1-227ENST00000591849 SLC29A3Q9BZD2 475 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 C12orf65Q9H3J6 166 aaKnown RBP9.43□□□□□ -0.9
BRCA1-227ENST00000591849 DDX31Q9H8H2 851 aaKnown RBP9.43□□□□□ -0.9
BRCA1-227ENST00000591849 ADAP2Q9NPF8 381 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 AGPAT4Q9NRZ5 378 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 EMCNQ9ULC0 261 aa9.43□□□□□ -0.9
BRCA1-227ENST00000591849 TRBV11-1A0A0K0K1C0 115 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 G3V2L1 256 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 H3BQF6 201 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 FCHO1O14526 889 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 OR10H2O60403 315 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 SCELO95171 688 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 ETHE1O95571 254 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 WDPCPO95876 746 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 GBAP04062 536 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 MYZAPP0CAP1 466 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 NR2F6P10588 404 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 BSGP35613 385 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 HNRNPFP52597 415 aaKnown RBP9.42□□□□□ -0.9
BRCA1-227ENST00000591849 MAPK12P53778 367 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 DNAJB13P59910 316 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 BTKQ06187 659 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 ELOAQ14241 798 aaKnown RBP9.42□□□□□ -0.9
BRCA1-227ENST00000591849 ELAVL1Q15717 326 aaKnown RBP9.42□□□□□ -0.9
BRCA1-227ENST00000591849 IMPG1Q17R60 797 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 SPDYAQ5MJ70 313 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 LIPMQ5VYY2 423 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 C18orf63Q68DL7 685 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 SH2D5Q6ZV89 423 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 CROCCP2Q86T23 111 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 CUZD1Q86UP6 607 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 TRABD2AQ86V40 505 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 CRLF3Q8IUI8 442 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 BEST3Q8N1M1 668 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 KIF2BQ8N4N8 673 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 MREGQ8N565 214 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 HORMAD2Q8N7B1 307 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 AMER2Q8N7J2 671 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 GBP7Q8N8V2 638 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-227ENST00000591849 B3GNT7Q8NFL0 401 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 PPP1R14CQ8TAE6 165 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 VMP1Q96GC9 406 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 FAM111AQ96PZ2 611 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 OR8D2Q9GZM6 311 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 BRF2Q9HAW0 419 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 FARSBQ9NSD9 589 aaKnown RBP9.42□□□□□ -0.9
BRCA1-227ENST00000591849 VPS29Q9UBQ0 182 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 COPS7AQ9UBW8 275 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 LGALS13Q9UHV8 139 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 RAB21Q9UL25 225 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 PPT2Q9UMR5 302 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 PLLPQ9Y342 182 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 ATG4BQ9Y4P1 393 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 TIMM22Q9Y584 194 aa9.42□□□□□ -0.9
BRCA1-227ENST00000591849 SPTBN1Q01082 2364 aaKnown RBP9.41□□□□□ -0.9
BRCA1-227ENST00000591849 A0A0A6YYD5 115 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 A0A1B0GTL3 188 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 OR5H15A6NDH6 313 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 GLOD5A6NK44 160 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 GABRR3A8MPY1 467 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 C17orf105B2RV13 164 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 CTIFO43310 598 aaKnown RBP9.41□□□□□ -0.9
BRCA1-227ENST00000591849 PROM1O43490 865 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 PRAMEF2O60811 474 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 TRIM13O60858 407 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 ZFAND5O76080 213 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 SORBS2O94875 1100 aaKnown RBP9.41□□□□□ -0.9
BRCA1-227ENST00000591849 GPR75O95800 540 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 CHEK2O96017 543 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 NEFHP12036 1026 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 HSD3B1P14060 373 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 ALOX15P16050 662 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-227ENST00000591849 HSD3B2P26439 372 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 PIK3R1P27986 724 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 HNRNPH2P55795 449 aaKnown RBP9.41□□□□□ -0.9
BRCA1-227ENST00000591849 FOXK1P85037 733 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 PLIN5Q00G26 463 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 TNFRSF17Q02223 184 aa9.41□□□□□ -0.9
BRCA1-227ENST00000591849 ACSM2AQ08AH3 577 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms