RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TGFB1P01137 390 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 SHBGP04278 402 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 PCNAP12004 261 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 ATP5A1P25705 553 aaKnown RBP10.49□□□□□ -0.73
SMAD4-211ENST00000590499 TSFMP43897 325 aaKnown RBP10.49□□□□□ -0.73
SMAD4-211ENST00000590499 TNFSF10P50591 281 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 OR4D2P58180 307 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 TGM3Q08188 693 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 BTBD16Q32M84 506 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 DEPDC1Q5TB30 811 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 KHDRBS2Q5VWX1 349 aaKnown RBP10.49□□□□□ -0.73
SMAD4-211ENST00000590499 CLEC18BQ6UXF7 455 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 SH2D5Q6ZV89 423 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 IQCKQ8N0W5 287 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 CNPY4Q8N129 248 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 ACOT4Q8N9L9 421 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 CLEC18CQ8NCF0 446 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 GALNT11Q8NCW6 608 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 SRFBP1Q8NEF9 429 aaKnown RBP10.49□□□□□ -0.73
SMAD4-211ENST00000590499 NFAM1Q8NET5 270 aaPredicted RBP10.49□□□□□ -0.73
SMAD4-211ENST00000590499 DNAJB14Q8TBM8 379 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 ACMSDQ8TDX5 336 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 ELP5Q8TE02 316 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 ZNF483Q8TF39 744 aaPredicted RBP10.49□□□□□ -0.73
SMAD4-211ENST00000590499 HAS2Q92819 552 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 SNRNP40Q96DI7 357 aaKnown RBP10.49□□□□□ -0.73
SMAD4-211ENST00000590499 CMTM7Q96FZ5 175 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 NPAS2Q99743 824 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 NTMT1Q9BV86 223 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 ZNF717Q9BY31 904 aaPredicted RBP10.49□□□□□ -0.73
SMAD4-211ENST00000590499 ROGDIQ9GZN7 287 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 ILKAPQ9H0C8 392 aaPredicted RBP10.49□□□□□ -0.73
SMAD4-211ENST00000590499 OR51B5Q9H339 312 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 NOL11Q9H8H0 719 aaKnown RBP10.49□□□□□ -0.73
SMAD4-211ENST00000590499 LYRM4Q9HD34 91 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 TMEM216Q9P0N5 145 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 PPT2Q9UMR5 302 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 NTNG1Q9Y2I2 539 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 RNF11Q9Y3C5 154 aa10.49□□□□□ -0.73
SMAD4-211ENST00000590499 A0A1B0GTL3 188 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 SAGE2PA6NJ88 616 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 PLPP1O14494 284 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 SH3BGRLO75368 114 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 CLDN9O95484 217 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 ETHE1O95571 254 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 WDPCPO95876 746 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 HIST1H1TP22492 207 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-211ENST00000590499 ARFIP1P53367 373 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 HSD17B7P56937 341 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 RPS13P62277 151 aaKnown RBP10.48□□□□□ -0.73
SMAD4-211ENST00000590499 ACTN3Q08043 901 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-211ENST00000590499 DDX39BQ13838 428 aaKnown RBP10.48□□□□□ -0.73
SMAD4-211ENST00000590499 ZNF169Q14929 603 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-211ENST00000590499 RASA2Q15283 850 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 TERF2Q15554 542 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 ZRSR2Q15696 482 aaKnown RBP10.48□□□□□ -0.73
SMAD4-211ENST00000590499 CPSF6Q16630 551 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMAD4-211ENST00000590499 GGTA1PQ4G0N0 100 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 TDRPQ86YL5 185 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 MYLK4Q86YV6 388 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-211ENST00000590499 ZNF595Q8IYB9 648 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 FAM47BQ8NA70 645 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 CATSPER1Q8NEC5 780 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 REPS1Q96D71 796 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 C19orf60Q96EN9 201 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 MTERF1Q99551 399 aaKnown RBP10.48□□□□□ -0.73
SMAD4-211ENST00000590499 MAPKAP1Q9BPZ7 522 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 SORBS1Q9BX66 1292 aaKnown RBP10.48□□□□□ -0.73
SMAD4-211ENST00000590499 SAP130Q9H0E3 1048 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 COPS7BQ9H9Q2 264 aaPredicted RBP10.48□□□□□ -0.73
SMAD4-211ENST00000590499 PRTFDC1Q9NRG1 225 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 PSD3Q9NYI0 1048 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 PLA2G3Q9NZ20 509 aa10.48□□□□□ -0.73
SMAD4-211ENST00000590499 PPIEQ9UNP9 301 aaKnown RBP10.48□□□□□ -0.73
SMAD4-211ENST00000590499 A0A1W2PPM1 405 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 DYTNA2CJ06 578 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 GOLGA8RI6L899 631 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 FOXE1O00358 373 aaPredicted RBP10.47□□□□□ -0.73
SMAD4-211ENST00000590499 SAP18O00422 153 aaKnown RBP10.47□□□□□ -0.73
SMAD4-211ENST00000590499 PPP6CO00743 305 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 DLX3O60479 287 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 GSTA1P08263 222 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 PPP2R1BP30154 601 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 SSR2P43308 183 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 UQCRFS1P47985 274 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 CCNG1P51959 295 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 VSNL1P62760 191 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 HERVK_113P63132 956 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 ARG2P78540 354 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 ZNF33BQ06732 778 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 SRSF1Q07955 248 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMAD4-211ENST00000590499 CUL3Q13618 768 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 AP5B1Q2VPB7 878 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 ACER2Q5QJU3 275 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 ABHD17BQ5VST6 288 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 FCRLBQ6BAA4 426 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 OR4C11Q6IEV9 310 aa10.47□□□□□ -0.73
SMAD4-211ENST00000590499 RPUSD3Q6P087 351 aaKnown RBP10.47□□□□□ -0.73
SMAD4-211ENST00000590499 RPS27LQ71UM5 84 aaKnown RBP10.47□□□□□ -0.73
SMAD4-211ENST00000590499 ATCAYQ86WG3 371 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms