RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 BCAS4Q8TDM0 211 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 TANKQ92844 425 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 FGF11Q92914 225 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 UCN3Q969E3 161 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 SPSB2Q99619 263 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 FAM117AQ9C073 453 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 ACTL8Q9H568 366 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 REEP4Q9H6H4 257 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 SOX17Q9H6I2 414 aaPredicted RBP14.29□□□□□ -0.12
ATG4D-211ENST00000589753 MIEF1Q9NQG6 463 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 PRDM9Q9NQV7 894 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 PRTFDC1Q9NRG1 225 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 SDR39U1Q9NRG7 319 aaPredicted RBP14.29□□□□□ -0.12
ATG4D-211ENST00000589753 MAPRE3Q9UPY8 281 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 EXO1Q9UQ84 846 aaKnown RBP14.29□□□□□ -0.12
ATG4D-211ENST00000589753 FARSAQ9Y285 508 aaKnown RBP14.29□□□□□ -0.12
ATG4D-211ENST00000589753 PADI2Q9Y2J8 665 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 ARL2BPQ9Y2Y0 163 aa14.29□□□□□ -0.12
ATG4D-211ENST00000589753 COPG1Q9Y678 874 aaKnown RBP14.29□□□□□ -0.12
ATG4D-211ENST00000589753 LOC101059948A0A1B0GTJ6 334 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 NDUFAB1O14561 156 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 SCAMP2O15127 329 aaKnown RBP14.28□□□□□ -0.12
ATG4D-211ENST00000589753 PGRMC2O15173 223 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 CTNSO60931 367 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 KLF7O75840 302 aaPredicted RBP14.28□□□□□ -0.12
ATG4D-211ENST00000589753 HEXBP07686 556 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 FURINP09958 794 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 PPP2R1BP30154 601 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 MRPL19P49406 292 aaKnown RBP14.28□□□□□ -0.12
ATG4D-211ENST00000589753 C21orf58P58505 322 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 UFM1P61960 85 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 BTG2P78543 158 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 ACTN3Q08043 901 aaPredicted RBP14.28□□□□□ -0.12
ATG4D-211ENST00000589753 SLC13A2Q13183 592 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 TGIF1Q15583 401 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 SLC48A1Q6P1K1 146 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 QSOX2Q6ZRP7 698 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 ERMP1Q7Z2K6 904 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 R3HCC1LQ7Z5L2 792 aaKnown RBP14.28□□□□□ -0.12
ATG4D-211ENST00000589753 LAPTM4BQ86VI4 370 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 TICAM1Q8IUC6 712 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 RIMKLAQ8IXN7 391 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 KRTCAP2Q8N6L1 136 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 OR2Y1Q8NGV0 311 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 DNAJB14Q8TBM8 379 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 STARD8Q92502 1023 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 MTERF3Q96E29 417 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 GPR87Q9BY21 358 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 ZNF385DQ9H6B1 395 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 EHD3Q9NZN3 535 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 ZIM2Q9NZV7 527 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 CES1P1Q9UKY3 287 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 PSME2Q9UL46 239 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 MKL2Q9ULH7 1088 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 PTRH2Q9Y3E5 179 aaKnown RBP14.28□□□□□ -0.12
ATG4D-211ENST00000589753 MMACHCQ9Y4U1 282 aa14.28□□□□□ -0.12
ATG4D-211ENST00000589753 NUP210LQ5VU65 1888 aa14.27□□□□□ -0.12
ATG4D-211ENST00000589753 MED19A0JLT2 244 aaPredicted RBP14.27□□□□□ -0.13
ATG4D-211ENST00000589753 OR2W5A6NFC9 320 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 WASHC1A8K0Z3 465 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 GABRR3A8MPY1 467 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 TERTO14746 1132 aaKnown RBP14.27□□□□□ -0.13
ATG4D-211ENST00000589753 CCDC22O60826 627 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 LDB3O75112 727 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 SLC22A3O75751 556 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 COX7A2P14406 83 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 DDX5P17844 614 aaKnown RBP14.27□□□□□ -0.13
ATG4D-211ENST00000589753 GPX3P22352 226 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 PTPN4P29074 926 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 FOLR3P41439 243 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 CLNS1AP54105 237 aaKnown RBP14.27□□□□□ -0.13
ATG4D-211ENST00000589753 FOXL2P58012 376 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 CBX1P83916 185 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 RHAGQ02094 409 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 PDE7AQ13946 482 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 PAOXQ6QHF9 649 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 SCUBE1Q8IWY4 988 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 CPSF7Q8N684 471 aaKnown RBP14.27□□□□□ -0.13
ATG4D-211ENST00000589753 CCDC197Q8NCU1 140 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 KIAA1143Q96AT1 154 aaPredicted RBP14.27□□□□□ -0.13
ATG4D-211ENST00000589753 PPCDCQ96CD2 204 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 KLHL29Q96CT2 875 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 ZNF764Q96H86 408 aaPredicted RBP14.27□□□□□ -0.13
ATG4D-211ENST00000589753 SLC45A3Q96JT2 553 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 TEX37Q96LM6 180 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 PTCHD1Q96NR3 888 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 ZBTB18Q99592 522 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 PRPF18Q99633 342 aaKnown RBP14.27□□□□□ -0.13
ATG4D-211ENST00000589753 CRB3Q9BUF7 120 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 VN1R1Q9GZP7 353 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 GPN2Q9H9Y4 310 aaPredicted RBP14.27□□□□□ -0.13
ATG4D-211ENST00000589753 MRGBPQ9NV56 204 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 C5AR2Q9P296 337 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 DKK4Q9UBT3 224 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 ATP6V1HQ9UI12 483 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 KCND3Q9UK17 655 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 UTS2RQ9UKP6 389 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 TCFL5Q9UL49 500 aa14.27□□□□□ -0.13
ATG4D-211ENST00000589753 IDSB3KWA1 339 aa14.26□□□□□ -0.13
ATG4D-211ENST00000589753 FGF17O60258 216 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms