RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 CEBPEQ15744 281 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 CYP51A1Q16850 503 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 MTX3Q5HYI7 312 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 CPZQ66K79 652 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 GLYATQ6IB77 296 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 OR52E8Q6IFG1 317 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 GUSBP11Q6P575 273 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 WDR74Q6RFH5 385 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-205ENST00000588745 PRSS41Q7RTY9 318 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 SPPL2CQ8IUH8 684 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 CLEC4FQ8N1N0 589 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 EID2Q8N6I1 236 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 PNPT1Q8TCS8 783 aaKnown RBP10.78□□□□□ -0.68
SMAD4-205ENST00000588745 NAT6Q93015 286 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 NSMCE2Q96MF7 247 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 CSF3RQ99062 836 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 SPATA9Q9BWV2 254 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 GTPBP2Q9BX10 602 aaKnown RBP10.78□□□□□ -0.68
SMAD4-205ENST00000588745 NPLQ9BXD5 320 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-205ENST00000588745 CHST8Q9H2A9 424 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 RAD21L1Q9H4I0 556 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 RPF2Q9H7B2 306 aaKnown RBP10.78□□□□□ -0.68
SMAD4-205ENST00000588745 CXorf36Q9H7Y0 433 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 ANKHQ9HCJ1 492 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 PRDM9Q9NQV7 894 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 GIMAP4Q9NUV9 329 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 MS4A12Q9NXJ0 267 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 KCMF1Q9P0J7 381 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 TMEM9Q9P0T7 183 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 ACSL6Q9UKU0 697 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 NAALAD2Q9Y3Q0 740 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 PCDHGA5Q9Y5G8 931 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 SPACA6W5XKT8 324 aa10.78□□□□□ -0.68
SMAD4-205ENST00000588745 RNF103-CHMP3A0A140T963 221 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 DHRS12A0PJE2 317 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 CPED1A4D0V7 1026 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 MYO1GB0I1T2 1018 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 CXCR6O00574 342 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 PGRMC2O15173 223 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 GALR2O43603 387 aaPredicted RBP10.77□□□□□ -0.68
SMAD4-205ENST00000588745 ERAL1O75616 437 aaKnown RBP10.77□□□□□ -0.68
SMAD4-205ENST00000588745 KRT75O95678 551 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 BAG2O95816 211 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 GPIP06744 558 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 TLX1P31314 330 aaPredicted RBP10.77□□□□□ -0.68
SMAD4-205ENST00000588745 CHI3L1P36222 383 aaPredicted RBP10.77□□□□□ -0.68
SMAD4-205ENST00000588745 ARL4DP49703 201 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 SEPHS1P49903 392 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 CDK9P50750 372 aaKnown RBP10.77□□□□□ -0.68
SMAD4-205ENST00000588745 NCBP2P52298 156 aaKnown RBP eCLIP10.77□□□□□ -0.68
SMAD4-205ENST00000588745 MVDP53602 400 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 SKP1P63208 163 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 HSD11B2P80365 405 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 HSPB3Q12988 150 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 SPIDRQ14159 915 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 MAP7Q14244 749 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 RGNQ15493 299 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 NDUFA9Q16795 377 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 INAVAQ3KP66 663 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 TCTE1Q5JU00 501 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 PERM1Q5SV97 790 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 IRAK1BP1Q5VVH5 260 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 NIPAL1Q6NVV3 410 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 ERICH5Q6P6B1 374 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 ANGPTL8Q6UXH0 198 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 RNF111Q6ZNA4 994 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 USP53Q70EK8 1073 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 KMT5CQ86Y97 462 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 ZZZ3Q8IYH5 903 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 CA13Q8N1Q1 262 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 OR52N2Q8NGI0 321 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 OR5AK3PQ8NH89 298 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 PSMA8Q8TAA3 256 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 FIG4Q92562 907 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 N4BP2L2Q92802 583 aaPredicted RBP10.77□□□□□ -0.68
SMAD4-205ENST00000588745 NCLNQ969V3 563 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 CNRIP1Q96F85 164 aaPredicted RBP10.77□□□□□ -0.68
SMAD4-205ENST00000588745 SLC41A2Q96JW4 573 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 C10orf90Q96M02 699 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 AMDHD1Q96NU7 426 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 BBS4Q96RK4 519 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 NUDT22Q9BRQ3 303 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 ARRDC1-AS1Q9H2J1 176 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 SMOC1Q9H4F8 434 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 GLIPR2Q9H4G4 154 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 GORASP2Q9H8Y8 452 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 SIRT3Q9NTG7 399 aaPredicted RBP10.77□□□□□ -0.68
SMAD4-205ENST00000588745 DNAAF2Q9NVR5 837 aaKnown RBP10.77□□□□□ -0.68
SMAD4-205ENST00000588745 IRAK4Q9NWZ3 460 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 PSME2Q9UL46 239 aa10.77□□□□□ -0.68
SMAD4-205ENST00000588745 SCN3AQ9NY46 2000 aa10.77□□□□□ -0.69
SMAD4-205ENST00000588745 FITM1A5D6W6 292 aa10.77□□□□□ -0.69
SMAD4-205ENST00000588745 FAM86C2PA6NEL3 165 aa10.77□□□□□ -0.69
SMAD4-205ENST00000588745 WASHC1A8K0Z3 465 aa10.77□□□□□ -0.69
SMAD4-205ENST00000588745 TOX3O15405 576 aaPredicted RBP10.77□□□□□ -0.69
SMAD4-205ENST00000588745 DNAJB6O75190 326 aa10.77□□□□□ -0.69
SMAD4-205ENST00000588745 RDH16O75452 317 aa10.77□□□□□ -0.69
SMAD4-205ENST00000588745 KCNK5O95279 499 aa10.77□□□□□ -0.69
SMAD4-205ENST00000588745 NTRK1P04629 796 aa10.77□□□□□ -0.69
SMAD4-205ENST00000588745 CSNK2A2P19784 350 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms