RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 EPHA4P54764 986 aa18.78■□□□□ 0.6
TRIM47-204ENST00000587339 PLK5Q496M5 336 aa18.78■□□□□ 0.6
TRIM47-204ENST00000587339 LRRC23Q53EV4 343 aaPredicted RBP18.78■□□□□ 0.6
TRIM47-204ENST00000587339 CMPK2Q5EBM0 449 aa18.78■□□□□ 0.6
TRIM47-204ENST00000587339 ZC3H12BQ5HYM0 836 aaKnown RBP18.78■□□□□ 0.6
TRIM47-204ENST00000587339 ARL10Q8N8L6 244 aa18.78■□□□□ 0.6
TRIM47-204ENST00000587339 C11orf65Q8NCR3 313 aa18.78■□□□□ 0.6
TRIM47-204ENST00000587339 MAL2Q969L2 176 aa18.78■□□□□ 0.6
TRIM47-204ENST00000587339 CENPNQ96H22 339 aaPredicted RBP18.78■□□□□ 0.6
TRIM47-204ENST00000587339 AMDHD1Q96NU7 426 aa18.78■□□□□ 0.6
TRIM47-204ENST00000587339 TMEM121BQ9BXQ6 578 aaPredicted RBP18.78■□□□□ 0.6
TRIM47-204ENST00000587339 OLAHQ9NV23 265 aa18.78■□□□□ 0.6
TRIM47-204ENST00000587339 PHF11Q9UIL8 331 aa18.78■□□□□ 0.6
TRIM47-204ENST00000587339 PILRBQ9UKJ0 227 aa18.78■□□□□ 0.6
TRIM47-204ENST00000587339 PADI4Q9UM07 663 aa18.78■□□□□ 0.6
TRIM47-204ENST00000587339 SAMD4AQ9UPU9 718 aaKnown RBP18.78■□□□□ 0.6
TRIM47-204ENST00000587339 RNF215Q9Y6U7 377 aa18.78■□□□□ 0.6
TRIM47-204ENST00000587339 HCRTR1O43613 425 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 NUDT21O43809 227 aaKnown RBP18.77■□□□□ 0.6
TRIM47-204ENST00000587339 NR2F6P10588 404 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 KDELR2P33947 212 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 RXRGP48443 463 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 NCBP2P52298 156 aaKnown RBP eCLIP18.77■□□□□ 0.6
TRIM47-204ENST00000587339 BNC1Q01954 994 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 DEFB110Q30KQ9 67 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 SPDYE7PQ495Y7 208 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 EID3Q8N140 333 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 ANKFN1Q8N957 763 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 ZFP28Q8NHY6 868 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 PSMA8Q8TAA3 256 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 SLC47A1Q96FL8 570 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 TCTN2Q96GX1 697 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 CIB1Q99828 191 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 GLIPR2Q9H4G4 154 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 YY1AP1Q9H869 796 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 SIRT3Q9NTG7 399 aaPredicted RBP18.77■□□□□ 0.6
TRIM47-204ENST00000587339 CES1P1Q9UKY3 287 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 PSME2Q9UL46 239 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 ENTPD4Q9Y227 616 aa18.77■□□□□ 0.6
TRIM47-204ENST00000587339 MRPS2Q9Y399 296 aaKnown RBP18.77■□□□□ 0.6
TRIM47-204ENST00000587339 TP53BP1Q12888 1972 aaPredicted RBP18.77■□□□□ 0.59
TRIM47-204ENST00000587339 KIF1CO43896 1103 aaKnown RBP18.76■□□□□ 0.59
TRIM47-204ENST00000587339 TNFRSF21O75509 655 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 C9P02748 559 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 CPN2P22792 545 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 GPC1P35052 558 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 PRIM2P49643 509 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 CDK9P50750 372 aaKnown RBP18.76■□□□□ 0.59
TRIM47-204ENST00000587339 NCSTNQ92542 709 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 NEURL3Q96EH8 262 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 CNRIP1Q96F85 164 aaPredicted RBP18.76■□□□□ 0.59
TRIM47-204ENST00000587339 TGM7Q96PF1 710 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 EPS8L2Q9H6S3 715 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 STARD5Q9NSY2 213 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 GIMAP4Q9NUV9 329 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 MS4A12Q9NXJ0 267 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 DAPP1Q9UN19 280 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 LRCH1Q9Y2L9 728 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 LDLRP01130 860 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 GIMD1P0DJR0 217 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 PCGF2P35227 344 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 CCT8P50990 548 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 LIM2P55344 173 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 GFERP55789 205 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 TNFRSF17Q02223 184 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 RBBP4Q09028 425 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 SPIDRQ14159 915 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 SHBQ15464 509 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 ATP6AP1Q15904 470 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 GCNT6Q5T4J0 391 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 SAXO2Q658L1 398 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 MCATQ8IVS2 390 aaKnown RBP18.76■□□□□ 0.59
TRIM47-204ENST00000587339 SLC35F3Q8IY50 421 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 KLHL6Q8WZ60 621 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 AHCYL2Q96HN2 611 aaKnown RBP18.76■□□□□ 0.59
TRIM47-204ENST00000587339 PYURFQ96I23 114 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 RAB33BQ9H082 229 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 KCMF1Q9P0J7 381 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 CNOT11Q9UKZ1 510 aaKnown RBP18.76■□□□□ 0.59
TRIM47-204ENST00000587339 SLC22A7Q9Y694 548 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 ZNF780BQ9Y6R6 833 aa18.76■□□□□ 0.59
TRIM47-204ENST00000587339 TECTAO75443 2155 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 TLCD2A6NGC4 264 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 MYO1GB0I1T2 1018 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 HRO43593 1189 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 SRPX2O60687 465 aaPredicted RBP18.75■□□□□ 0.59
TRIM47-204ENST00000587339 ZNF682O95780 498 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 GLB1P16278 677 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 HOXB6P17509 224 aaKnown RBP18.75■□□□□ 0.59
TRIM47-204ENST00000587339 TLX1P31314 330 aaPredicted RBP18.75■□□□□ 0.59
TRIM47-204ENST00000587339 MPIP34949 423 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 CCT3P49368 545 aaKnown RBP18.75■□□□□ 0.59
TRIM47-204ENST00000587339 RUNX2Q13950 521 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 NKG7Q16617 165 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 NKAIN2Q5VXU1 208 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 GALNT4Q8N4A0 578 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 PIGKQ92643 395 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 ZDHHC12Q96GR4 267 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 BDH2Q9BUT1 245 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 TMEM38AQ9H6F2 299 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms