RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 C1QL3Q5VWW1 255 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 TTC19Q6DKK2 380 aaPredicted RBP16.48■□□□□ 0.23
TPM4-206ENST00000587201 HIST2H2BCQ6DN03 193 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 ADGRD1Q6QNK2 874 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 GPR180Q86V85 440 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 OR4N5Q8IXE1 308 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 ZCCHC7Q8N3Z6 543 aaKnown RBP16.48■□□□□ 0.23
TPM4-206ENST00000587201 MORN4Q8NDC4 146 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 C7orf57Q8NEG2 295 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 OR14A16Q8NHC5 309 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 PTPMT1Q8WUK0 201 aaPredicted RBP16.48■□□□□ 0.23
TPM4-206ENST00000587201 ANKRD9Q96BM1 317 aaPredicted RBP16.48■□□□□ 0.23
TPM4-206ENST00000587201 MTBPQ96DY7 904 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 NSUN5Q96P11 429 aaKnown RBP16.48■□□□□ 0.23
TPM4-206ENST00000587201 NTMT1Q9BV86 223 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 OR8D2Q9GZM6 311 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 RPF2Q9H7B2 306 aaKnown RBP16.48■□□□□ 0.23
TPM4-206ENST00000587201 PHF11Q9UIL8 331 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 SPTBN1Q01082 2364 aaKnown RBP16.48■□□□□ 0.23
TPM4-206ENST00000587201 C17orf105B2RV13 164 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 FOXE1O00358 373 aaPredicted RBP16.47■□□□□ 0.23
TPM4-206ENST00000587201 FGF17O60258 216 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 NME2P1O60361 137 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 ETHE1O95571 254 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 FAM153BP0C7A2 387 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 NME2P22392 152 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 GCAP28676 217 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 TLX1P31314 330 aaPredicted RBP16.47■□□□□ 0.23
TPM4-206ENST00000587201 SSR4P51571 173 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 TNFRSF17Q02223 184 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 RBPJQ06330 500 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 CUL3Q13618 768 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 FAM153CQ494X1 144 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 TEX35Q5T0J7 233 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 CYP20A1Q6UW02 462 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 HSDL2Q6YN16 418 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 MAMDC2Q7Z304 686 aaPredicted RBP16.47■□□□□ 0.23
TPM4-206ENST00000587201 ZNF227Q86WZ6 799 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 SREK1Q8WXA9 508 aaKnown RBP16.47■□□□□ 0.23
TPM4-206ENST00000587201 FRMD6Q96NE9 622 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 DGAT2Q96PD7 388 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 LIN28AQ9H9Z2 209 aaKnown RBP16.47■□□□□ 0.23
TPM4-206ENST00000587201 ZBTB26Q9HCK0 441 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 SEMA4BQ9NPR2 832 aaPredicted RBP16.47■□□□□ 0.23
TPM4-206ENST00000587201 LYARQ9NX58 379 aaKnown RBP16.47■□□□□ 0.23
TPM4-206ENST00000587201 PSD3Q9NYI0 1048 aa16.47■□□□□ 0.23
TPM4-206ENST00000587201 YARS2Q9Y2Z4 477 aaKnown RBP16.47■□□□□ 0.23
TPM4-206ENST00000587201 TRGV8A0A0C4DH27 118 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 IQANK1A0A1B0GTG1 560 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 NPIPA5E9PKD4 350 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 EEDO75530 441 aaKnown RBP16.46■□□□□ 0.23
TPM4-206ENST00000587201 WISP2O76076 250 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 CLDN1O95832 211 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 COX7A2P14406 83 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 BSGP35613 385 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 BUD31P41223 144 aaPredicted RBP16.46■□□□□ 0.23
TPM4-206ENST00000587201 HNRNPH2P55795 449 aaKnown RBP16.46■□□□□ 0.23
TPM4-206ENST00000587201 TRAF3Q13114 568 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 SLC29A2Q14542 456 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 C18orf63Q68DL7 685 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 TIFABQ6ZNK6 161 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 RPS27LQ71UM5 84 aaKnown RBP16.46■□□□□ 0.23
TPM4-206ENST00000587201 MILR1Q7Z6M3 343 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 NUDT13Q86X67 352 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 CYP4Z2PQ8N1L4 340 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 CPSF7Q8N684 471 aaKnown RBP16.46■□□□□ 0.23
TPM4-206ENST00000587201 SLC2A12Q8TD20 617 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 TANKQ92844 425 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 GPR137Q96N19 417 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 SERPINI1Q99574 410 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 ZNF717Q9BY31 904 aaPredicted RBP16.46■□□□□ 0.23
TPM4-206ENST00000587201 TSPAN10Q9H1Z9 355 aaPredicted RBP16.46■□□□□ 0.23
TPM4-206ENST00000587201 COPS7AQ9UBW8 275 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 NPIPA1Q9UND3 350 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 KLF13Q9Y2Y9 288 aaPredicted RBP16.46■□□□□ 0.23
TPM4-206ENST00000587201 ATG4BQ9Y4P1 393 aa16.46■□□□□ 0.23
TPM4-206ENST00000587201 A0A0A6YYD5 115 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 A8MT66 165 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 WWP2O00308 870 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 PRKRAO75569 313 aaKnown RBP16.45■□□□□ 0.22
TPM4-206ENST00000587201 OR2J2O76002 312 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 RPS17P08708 135 aaKnown RBP16.45■□□□□ 0.22
TPM4-206ENST00000587201 SBK3P0C264 359 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 TAC1P20366 129 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 STT3AP46977 705 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 FOLH1Q04609 750 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 IFT88Q13099 833 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 BIKQ13323 160 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 KRTCAP3Q53RY4 240 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 FRG2Q64ET8 278 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 C16orf47Q6ZP98 133 aaPredicted RBP16.45■□□□□ 0.22
TPM4-206ENST00000587201 GSPT2Q8IYD1 628 aaKnown RBP16.45■□□□□ 0.22
TPM4-206ENST00000587201 ZNF321PQ8N8H1 164 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 OR4F6Q8NGB9 312 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 ASB15Q8WXK1 588 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 RBM18Q96H35 190 aaKnown RBP16.45■□□□□ 0.22
TPM4-206ENST00000587201 FRG2BQ96QU4 278 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 DDX31Q9H8H2 851 aaKnown RBP16.45■□□□□ 0.22
TPM4-206ENST00000587201 MYOTQ9UBF9 498 aa16.45■□□□□ 0.22
TPM4-206ENST00000587201 SH3BGRL2Q9UJC5 107 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms