RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 EFTUD2Q15029 972 aaKnown RBP eCLIP13.03□□□□□ -0.322e-19■■■■■ 53.3
CXXC1-208ENST00000587170 CYP1B1Q16678 543 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 ZNF791Q3KP31 576 aaPredicted RBP13.03□□□□□ -0.32
CXXC1-208ENST00000587170 TMIGD1Q6UXZ0 262 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 VN1R5Q7Z5H4 357 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 CLNKQ7Z7G1 428 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 NAXEQ8NCW5 288 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 WFDC11Q8NEX6 87 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 SLC2A12Q8TD20 617 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 PAQR8Q8TEZ7 354 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 ARSGQ96EG1 525 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 C18orf12Q96KH6 178 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 NT5DC2Q9H857 520 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 PLAC1Q9HBJ0 212 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 ACKR4Q9NPB9 350 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 RYDENQ9NUL5 291 aaKnown RBP13.03□□□□□ -0.32
CXXC1-208ENST00000587170 QPCTLQ9NXS2 382 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 DSCAMO60469 2012 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 DVL2O14641 736 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 C1GALT1C1LP0DN25 315 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 SAT1P21673 171 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 CERS1P27544 350 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 HPDP32754 393 aaPredicted RBP13.02□□□□□ -0.33
CXXC1-208ENST00000587170 HNMTP50135 292 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 MTTPP55157 894 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 TBL3Q12788 808 aaKnown RBP13.02□□□□□ -0.33
CXXC1-208ENST00000587170 RCN2Q14257 317 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 SPANXN3Q5MJ09 141 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 FAM45BPQ6NSW5 357 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 ABHD17CQ6PCB6 329 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 LYPD8Q6UX82 237 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 PPIL6Q8IXY8 311 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 OR5L2Q8NGL0 311 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 NUBPLQ8TB37 319 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 FAM45AQ8TCE6 357 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 KIAA1191Q96A73 305 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 LRRC46Q96FV0 321 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 CERS2Q96G23 380 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 NAT9Q9BTE0 207 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 OR8D2Q9GZM6 311 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 EHD1Q9H4M9 534 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 LDAHQ9H6V9 325 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 PLEKHF2Q9H8W4 249 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 SLC17A6Q9P2U8 582 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 ZNF629Q9UEG4 869 aaPredicted RBP13.02□□□□□ -0.33
CXXC1-208ENST00000587170 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.02□□□□□ -0.33
CXXC1-208ENST00000587170 HIVEP2P31629 2446 aa13.02□□□□□ -0.33
CXXC1-208ENST00000587170 C17orf105B2RV13 164 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 IGKV3-11P04433 115 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 IFNA16P05015 189 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 RFPL3SP0C7P2 107 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 TACR1P25103 407 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 CDC25BP30305 580 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 CXCR5P32302 372 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 TIMP3P35625 211 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 IGLV3-21P80748 117 aaPredicted RBP13.01□□□□□ -0.33
CXXC1-208ENST00000587170 SORDQ00796 357 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 SERTAD2Q14140 314 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 SLBPQ14493 270 aaKnown RBP eCLIP13.01□□□□□ -0.33
CXXC1-208ENST00000587170 ACSF3Q4G176 576 aaPredicted RBP13.01□□□□□ -0.33
CXXC1-208ENST00000587170 PIGGQ5H8A4 983 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 RNASEH2BQ5TBB1 312 aaKnown RBP13.01□□□□□ -0.33
CXXC1-208ENST00000587170 TRIM40Q6P9F5 258 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 MAATS1Q7Z4T9 603 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 DND1Q8IYX4 353 aaKnown RBP13.01□□□□□ -0.33
CXXC1-208ENST00000587170 RASGEF1CQ8N431 466 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 TRIM58Q8NG06 486 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 NEIL3Q8TAT5 605 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 ZNF721Q8TF20 911 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 SMR3AQ99954 134 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 ALOXE3Q9BYJ1 711 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 REXO4Q9GZR2 422 aaKnown RBP13.01□□□□□ -0.33
CXXC1-208ENST00000587170 PROK2Q9HC23 129 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 LYRM4Q9HD34 91 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 ZFP64Q9NPA5 681 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 MTRF1LQ9UGC7 380 aaKnown RBP13.01□□□□□ -0.33
CXXC1-208ENST00000587170 BOKQ9UMX3 212 aaPredicted RBP13.01□□□□□ -0.33
CXXC1-208ENST00000587170 VWA7Q9Y334 891 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 OARD1Q9Y530 152 aa13.01□□□□□ -0.33
CXXC1-208ENST00000587170 CDC7O00311 574 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 SCELO95171 688 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 ETHE1O95571 254 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 EPPINO95925 133 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 INHBBP09529 407 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 EPXP11678 715 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 BMP5P22003 454 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 PIGAP37287 484 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 PLA2G16P53816 162 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 STX4Q12846 297 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 TEDDM1Q5T9Z0 273 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 SLC22A10Q63ZE4 541 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 LACC1Q8IV20 430 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 C9orf40Q8IXQ3 194 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 SLC15A4Q8N697 577 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 C7orf57Q8NEG2 295 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 TNIP2Q8NFZ5 429 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 SPACA9Q96E40 222 aaPredicted RBP13□□□□□ -0.33
CXXC1-208ENST00000587170 WDR34Q96EX3 536 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 RBSNQ9H1K0 784 aa13□□□□□ -0.33
CXXC1-208ENST00000587170 SLC6A15Q9H2J7 730 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms