RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 OR52E8Q6IFG1 317 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 NOXRED1Q6NXP6 359 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 ANKRD37Q7Z713 158 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 TMEM102Q8N9M5 508 aaPredicted RBP18■□□□□ 0.47
DDX39A-204ENST00000586558 TMEM52Q8NDY8 209 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 FCRL1Q96LA6 429 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 FER1L6-AS2Q96M78 137 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 TEX10Q9NXF1 929 aaPredicted RBP18■□□□□ 0.47
DDX39A-204ENST00000586558 TCRBV16S1A1N1A0A5B0 115 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 C1orf226A1L170 272 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 OR2W5A6NFC9 320 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 TRPC5OSA6NMA1 111 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 DRD2P14416 443 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 MAPK1P28482 360 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 RPL38P63173 70 aaKnown RBP17.99■□□□□ 0.47
DDX39A-204ENST00000586558 SERTAD2Q14140 314 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 COL28A1Q2UY09 1125 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 DEFB109BQ30KR1 87 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 GALNTL6Q49A17 601 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 C18orf63Q68DL7 685 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 C19orf48Q6RUI8 117 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 LANCL3Q6ZV70 420 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 CPEB2Q7Z5Q1 589 aaKnown RBP17.99■□□□□ 0.47
DDX39A-204ENST00000586558 LRRC34Q8IZ02 419 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 PIWIL2Q8TC59 973 aaKnown RBP17.99■□□□□ 0.47
DDX39A-204ENST00000586558 TSLPQ969D9 159 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 TM4SF18Q96CE8 201 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 TUBGCP3Q96CW5 907 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 C3orf30Q96M34 536 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 ZNF700Q9H0M5 742 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 MEAF6Q9HAF1 191 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 MYNNQ9NPC7 610 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 FBXL4Q9UKA2 621 aa17.99■□□□□ 0.47
DDX39A-204ENST00000586558 IGHV1-45A0A0A0MS14 117 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 ATP6AP2A0A1C7CYW4 349 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 ATP6AP2O75787 350 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 HPP00738 406 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 JUNP05412 331 aaKnown RBP17.98■□□□□ 0.47
DDX39A-204ENST00000586558 COX6A1P12074 109 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 OR4D2P58180 307 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 TAS2R50P59544 299 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 IGLV3-21P80748 117 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-204ENST00000586558 STX4Q12846 297 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 MAD2L1Q13257 205 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-204ENST00000586558 HEPACAMQ14CZ8 416 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 RFTN2Q52LD8 501 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-204ENST00000586558 DCAF10Q5QP82 559 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 C6orf136Q5SQH8 315 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 BORAQ6PGQ7 559 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 IKBIPQ70UQ0 350 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 NDUFAF7Q7L592 441 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 APLFQ8IW19 511 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-204ENST00000586558 PARP9Q8IXQ6 854 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 CLEC1AQ8NC01 280 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 C16orf78Q8WTQ4 265 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 APOBEC4Q8WW27 367 aaKnown RBP17.98■□□□□ 0.47
DDX39A-204ENST00000586558 C8orf44Q96CB5 159 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 CRELD1Q96HD1 420 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 TUBB6Q9BUF5 446 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 EBPLQ9BY08 206 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 NUF2Q9BZD4 464 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 NECTIN3Q9NQS3 549 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 MARCOQ9UEW3 520 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-204ENST00000586558 DLGAP4Q9Y2H0 992 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 POLR3HQ9Y535 204 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-204ENST00000586558 PCDHA9Q9Y5H5 950 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 KCNMB2Q9Y691 235 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 CACNA1BQ00975 2339 aa17.98■□□□□ 0.47
DDX39A-204ENST00000586558 ZFHX4Q86UP3 3567 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 ITPR1Q14643 2758 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 NSG1A0A0A6YYJ2 146 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 PEX11AO75192 247 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 GPR75O95800 540 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 RHDQ02161 417 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 EEF1A2Q05639 463 aaKnown RBP17.97■□□□□ 0.47
DDX39A-204ENST00000586558 TERF2Q15554 542 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 SFT2D3Q587I9 215 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 CLNKQ7Z7G1 428 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.97■□□□□ 0.47
DDX39A-204ENST00000586558 DNAJB14Q8TBM8 379 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 SLCO1B3Q9NPD5 702 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 EHD3Q9NZN3 535 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 PSME2Q9UL46 239 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 CLDN16Q9Y5I7 305 aa17.97■□□□□ 0.47
DDX39A-204ENST00000586558 ARGFXA6NJG6 315 aa17.96■□□□□ 0.47
DDX39A-204ENST00000586558 TGFBR3LH3BV60 316 aa17.96■□□□□ 0.47
DDX39A-204ENST00000586558 FGF17O60258 216 aa17.96■□□□□ 0.47
DDX39A-204ENST00000586558 LDB3O75112 727 aa17.96■□□□□ 0.47
DDX39A-204ENST00000586558 IL3P08700 152 aa17.96■□□□□ 0.47
DDX39A-204ENST00000586558 PRR35P0CG20 571 aa17.96■□□□□ 0.47
DDX39A-204ENST00000586558 KITP10721 976 aa17.96■□□□□ 0.47
DDX39A-204ENST00000586558 AP2B1P63010 937 aa17.96■□□□□ 0.47
DDX39A-204ENST00000586558 FOLH1Q04609 750 aa17.96■□□□□ 0.47
DDX39A-204ENST00000586558 ACTN3Q08043 901 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-204ENST00000586558 AIMP2Q13155 320 aaKnown RBP17.96■□□□□ 0.47
DDX39A-204ENST00000586558 PCOLCEQ15113 449 aa17.96■□□□□ 0.47
DDX39A-204ENST00000586558 SLC48A1Q6P1K1 146 aa17.96■□□□□ 0.47
DDX39A-204ENST00000586558 WDR75Q8IWA0 830 aaKnown RBP17.96■□□□□ 0.47
DDX39A-204ENST00000586558 TMEM132CQ8N3T6 1108 aa17.96■□□□□ 0.47
DDX39A-204ENST00000586558 FNDC5Q8NAU1 212 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms