RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 ASB1Q9Y576 335 aa19.17■□□□□ 0.66
SRSF1-206ENST00000583741 STX16-NPEPL1H3BU86 382 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 STX16O14662 325 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 IMPDH1P20839 514 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 AP1S2P56377 157 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 HERVK_113P63132 956 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 STX3Q13277 289 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 SETDB1Q15047 1291 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 CDKL4Q5MAI5 379 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 SLC25A25Q6KCM7 469 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 KIF2BQ8N4N8 673 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 CPSF7Q8N684 471 aaKnown RBP19.16■□□□□ 0.66
SRSF1-206ENST00000583741 CCNYL1Q8N7R7 359 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 PLPP5Q8NEB5 264 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 OR5T3Q8NGG3 340 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 OR6Y1Q8NGX8 325 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 PHF10Q8WUB8 498 aaKnown RBP19.16■□□□□ 0.66
SRSF1-206ENST00000583741 CHTF18Q8WVB6 975 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 L3HYPDHQ96EM0 354 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 CHMP6Q96FZ7 201 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 ERVK-6Q9BXR3 956 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 MCCC2Q9HCC0 563 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 MAP1AP78559 2803 aaPredicted RBP19.16■□□□□ 0.66
SRSF1-206ENST00000583741 E9PLN8 166 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 LCMT2O60294 686 aaKnown RBP19.16■□□□□ 0.66
SRSF1-206ENST00000583741 SLC25A12O75746 678 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 VIMP08670 466 aaKnown RBP19.16■□□□□ 0.66
SRSF1-206ENST00000583741 ZNF24P17028 368 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 HRH2P25021 359 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 SLC26A5P58743 744 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 ACTN3Q08043 901 aaPredicted RBP19.16■□□□□ 0.66
SRSF1-206ENST00000583741 MAPKAPK3Q16644 382 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 CFAP157Q5JU67 520 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 CES4AQ5XG92 561 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 SULT1C3Q6IMI6 304 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 MBOAT1Q6ZNC8 495 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 ASPGQ86U10 573 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 ZNF227Q86WZ6 799 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 LGI4Q8N135 537 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 HORMAD2Q8N7B1 307 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 FAM98AQ8NCA5 519 aaKnown RBP19.16■□□□□ 0.66
SRSF1-206ENST00000583741 CAMKVQ8NCB2 501 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 THAP11Q96EK4 314 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 ZNF317Q96PQ6 595 aaPredicted RBP19.16■□□□□ 0.66
SRSF1-206ENST00000583741 TREX2Q9BQ50 279 aaPredicted RBP19.16■□□□□ 0.66
SRSF1-206ENST00000583741 VKORC1Q9BQB6 163 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 CDCP1Q9H5V8 836 aa19.16■□□□□ 0.66
SRSF1-206ENST00000583741 INTS1Q8N201 2190 aaKnown RBP19.15■□□□□ 0.66
SRSF1-206ENST00000583741 HCFC1P51610 2035 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 GMNCA6NCL1 334 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 MAGEB17A8MXT2 336 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 TMEM114B3SHH9 223 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 NME2P1O60361 137 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 SIX3O95343 332 aaPredicted RBP19.15■□□□□ 0.66
SRSF1-206ENST00000583741 NME2P22392 152 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 SEC24CP53992 1094 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 TAS2R50P59544 299 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 ZNF678Q5SXM1 525 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 MEX3BQ6ZN04 569 aaKnown RBP19.15■□□□□ 0.66
SRSF1-206ENST00000583741 FAM47EQ6ZV65 393 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 TCAIMQ8N3R3 496 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 ELP5Q8TE02 316 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 SLC13A3Q8WWT9 602 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 SDCCAG3Q96C92 435 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 RHBDF1Q96CC6 855 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 OR1F2PQ96R84 312 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 WWOXQ9NZC7 414 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 PPT2Q9UMR5 302 aa19.15■□□□□ 0.66
SRSF1-206ENST00000583741 DNAJB6O75190 326 aa19.14■□□□□ 0.65
SRSF1-206ENST00000583741 SUPT7LO94864 414 aa19.14■□□□□ 0.65
SRSF1-206ENST00000583741 TPP2P29144 1249 aaPredicted RBP19.14■□□□□ 0.65
SRSF1-206ENST00000583741 PTGER1P34995 402 aa19.14■□□□□ 0.65
SRSF1-206ENST00000583741 SLC1A6P48664 564 aa19.14■□□□□ 0.65
SRSF1-206ENST00000583741 RCN2Q14257 317 aa19.14■□□□□ 0.65
SRSF1-206ENST00000583741 FBXO48Q5FWF7 155 aa19.14■□□□□ 0.65
SRSF1-206ENST00000583741 CAPN13Q6MZZ7 669 aaPredicted RBP19.14■□□□□ 0.65
SRSF1-206ENST00000583741 RPS19BP1Q86WX3 136 aaKnown RBP19.14■□□□□ 0.65
SRSF1-206ENST00000583741 LRRC34Q8IZ02 419 aa19.14■□□□□ 0.65
SRSF1-206ENST00000583741 CA5BP1Q8WTZ4 195 aa19.14■□□□□ 0.65
SRSF1-206ENST00000583741 SLCO1B3Q9NPD5 702 aa19.14■□□□□ 0.65
SRSF1-206ENST00000583741 PTBP2Q9UKA9 531 aaKnown RBP19.14■□□□□ 0.65
SRSF1-206ENST00000583741 TNPO3Q9Y5L0 923 aaKnown RBP19.14■□□□□ 0.65
SRSF1-206ENST00000583741 SLC22A7Q9Y694 548 aa19.14■□□□□ 0.65
SRSF1-206ENST00000583741 ZNF469Q96JG9 3925 aaPredicted RBP19.13■□□□□ 0.65
SRSF1-206ENST00000583741 PRRG2O14669 202 aa19.13■□□□□ 0.65
SRSF1-206ENST00000583741 NPHS1O60500 1241 aa19.13■□□□□ 0.65
SRSF1-206ENST00000583741 SNNO75324 88 aaPredicted RBP19.13■□□□□ 0.65
SRSF1-206ENST00000583741 RPS17P08708 135 aaKnown RBP19.13■□□□□ 0.65
SRSF1-206ENST00000583741 HNMTP50135 292 aa19.13■□□□□ 0.65
SRSF1-206ENST00000583741 OR4D2P58180 307 aa19.13■□□□□ 0.65
SRSF1-206ENST00000583741 ABCE1P61221 599 aaKnown RBP19.13■□□□□ 0.65
SRSF1-206ENST00000583741 UNC50Q53HI1 259 aa19.13■□□□□ 0.65
SRSF1-206ENST00000583741 UBTD2Q8WUN7 234 aa19.13■□□□□ 0.65
SRSF1-206ENST00000583741 ESAMQ96AP7 390 aa19.13■□□□□ 0.65
SRSF1-206ENST00000583741 FBXL8Q96CD0 374 aa19.13■□□□□ 0.65
SRSF1-206ENST00000583741 C1QTNF3Q9BXJ4 246 aa19.13■□□□□ 0.65
SRSF1-206ENST00000583741 ATG10Q9H0Y0 220 aa19.13■□□□□ 0.65
SRSF1-206ENST00000583741 FGFR1OP2Q9NVK5 253 aa19.13■□□□□ 0.65
SRSF1-206ENST00000583741 THAP1Q9NVV9 213 aa19.13■□□□□ 0.65
SRSF1-206ENST00000583741 LRRC14BA6NHZ5 514 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms