RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 NCCRP1Q6ZVX7 275 aaPredicted RBP19.02■□□□□ 0.64
SHMT1-209ENST00000582653 OR4N5Q8IXE1 308 aa19.02■□□□□ 0.64
SHMT1-209ENST00000582653 ZFP62Q8NB50 900 aaPredicted RBP19.02■□□□□ 0.64
SHMT1-209ENST00000582653 HUS1BQ8NHY5 278 aa19.02■□□□□ 0.64
SHMT1-209ENST00000582653 ANKRD9Q96BM1 317 aaPredicted RBP19.02■□□□□ 0.64
SHMT1-209ENST00000582653 CMTM7Q96FZ5 175 aa19.02■□□□□ 0.64
SHMT1-209ENST00000582653 GPR78Q96P69 363 aa19.02■□□□□ 0.64
SHMT1-209ENST00000582653 DMRTA2Q96SC8 542 aa19.02■□□□□ 0.64
SHMT1-209ENST00000582653 NCOA6Q14686 2063 aaPredicted RBP19.02■□□□□ 0.63
SHMT1-209ENST00000582653 GTF3C1Q12789 2109 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 ABCA12Q86UK0 2595 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 WWP2O00308 870 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 KLHL2O95198 593 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 SNRPB2P08579 225 aaKnown RBP19.01■□□□□ 0.63
SHMT1-209ENST00000582653 CPN2P22792 545 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 TYK2P29597 1187 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 PTGER1P34995 402 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 PTGS2P35354 604 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 SSR2P43308 183 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 SSR4P51571 173 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 SLAMF1Q13291 335 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 ACAP2Q15057 778 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 OR4C11Q6IEV9 310 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 PLD6Q8N2A8 252 aaKnown RBP19.01■□□□□ 0.63
SHMT1-209ENST00000582653 MORN4Q8NDC4 146 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 DAZLQ92904 295 aaKnown RBP19.01■□□□□ 0.63
SHMT1-209ENST00000582653 MTERF1Q99551 399 aaKnown RBP19.01■□□□□ 0.63
SHMT1-209ENST00000582653 OR8D2Q9GZM6 311 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 VPS11Q9H270 941 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 TIMMDC1Q9NPL8 285 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 ZNF358Q9NW07 568 aa19.01■□□□□ 0.63
SHMT1-209ENST00000582653 DMGDHQ9UI17 866 aaKnown RBP19.01■□□□□ 0.63
SHMT1-209ENST00000582653 A0A1B0GTH9 108 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 C17orf105B2RV13 164 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 C19orf84I3L1E1 186 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 TFECO14948 347 aaPredicted RBP19■□□□□ 0.63
SHMT1-209ENST00000582653 HS6ST1O60243 411 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 KLK8O60259 260 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 SCELO95171 688 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 SIX3O95343 332 aaPredicted RBP19■□□□□ 0.63
SHMT1-209ENST00000582653 PHBP35232 272 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 ALDH18A1P54886 795 aaKnown RBP19■□□□□ 0.63
SHMT1-209ENST00000582653 IL20RBQ6UXL0 311 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 HSDL2Q6YN16 418 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 C3P1Q6ZMU1 363 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 CCDC91Q7Z6B0 441 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 GPALPP1Q8IXQ4 340 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 ZNF295-AS1Q8N0V1 137 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 OR14A16Q8NHC5 309 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 FAM57AQ8TBR7 257 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 ZNF592Q92610 1267 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 ACSS3Q9H6R3 686 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 ACTR8Q9H981 624 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 DMRT3Q9NQL9 472 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 CPSF2Q9P2I0 782 aaKnown RBP19■□□□□ 0.63
SHMT1-209ENST00000582653 MYOTQ9UBF9 498 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 ERVK-11Q9UQG0 969 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 FBN2P35556 2912 aa19■□□□□ 0.63
SHMT1-209ENST00000582653 CSMD2Q7Z408 3487 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 PCNX1Q96RV3 2341 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 FGF17O60258 216 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 OR6B1O95007 311 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 ETHE1O95571 254 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 ACSL3O95573 720 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 SERPINB1P30740 379 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 KIR3DL1P43629 444 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 SERPINB8P50452 374 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 RPS13P62277 151 aaKnown RBP18.99■□□□□ 0.63
SHMT1-209ENST00000582653 SERTAD2Q14140 314 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 WHAMMP3Q1A5X7 153 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 CMPK2Q5EBM0 449 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 LIPJQ5W064 366 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 C18orf63Q68DL7 685 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 GOLGA7Q7Z5G4 137 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 NOA1Q8NC60 698 aaKnown RBP18.99■□□□□ 0.63
SHMT1-209ENST00000582653 C7orf57Q8NEG2 295 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 SLC2A12Q8TD20 617 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 ASB15Q8WXK1 588 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 IFT81Q8WYA0 676 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 RGMAQ96B86 450 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 PPWD1Q96BP3 646 aaKnown RBP18.99■□□□□ 0.63
SHMT1-209ENST00000582653 RASL10BQ96S79 203 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 TRIM8Q9BZR9 551 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 CDC42EP4Q9H3Q1 356 aaKnown RBP18.99■□□□□ 0.63
SHMT1-209ENST00000582653 IPPKQ9H8X2 491 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 PLSCR2Q9NRY7 297 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 DEPPQ9NTK1 212 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 ADGRE2Q9UHX3 823 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 RNF11Q9Y3C5 154 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 HRH3Q9Y5N1 445 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 SPACA6W5XKT8 324 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 PDZD2O15018 2839 aa18.99■□□□□ 0.63
SHMT1-209ENST00000582653 WASHC1A8K0Z3 465 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 A8MVJ9 347 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 PLPP1O14494 284 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 ZNF354AO60765 605 aaPredicted RBP18.98■□□□□ 0.63
SHMT1-209ENST00000582653 PRKRAO75569 313 aaKnown RBP18.98■□□□□ 0.63
SHMT1-209ENST00000582653 TUBB4AP04350 444 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 SOX3P41225 446 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 PIK3CBP42338 1070 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms