RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 PIK3IP1Q96FE7 263 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 WDYHV1Q96HA8 205 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 DESI2Q9BSY9 194 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 KIFC1Q9BW19 673 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 NPLQ9BXD5 320 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 AICDAQ9GZX7 198 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 RBSNQ9H1K0 784 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 SPNS1Q9H2V7 528 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 PIGMQ9H3S5 423 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 KLHL31Q9H511 634 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 INTS10Q9NVR2 710 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 ZNF226Q9NYT6 803 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 CNIH4Q9P003 139 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 VTI1BQ9UEU0 232 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 PDE10AQ9Y233 779 aa12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 CHCHD2Q9Y6H1 151 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-219ENST00000581660 HEATR5AQ86XA9 2040 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 BTNL10A8MVZ5 291 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 A8MXE2 369 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 GOLGA8KD6RF30 607 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 RNF223E7ERA6 249 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 GOLGA8TH3BQL2 631 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 TRIM3O75382 744 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 HPNP05981 417 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 APRTP07741 180 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 SERPINA6P08185 405 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 GDF1P27539 372 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 STIP1P31948 543 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 RAB38P57729 211 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 SESN2P58004 480 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 RUNX2Q13950 521 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 WIPI1Q5MNZ9 446 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 MBOAT1Q6ZNC8 495 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 PLEKHM3Q6ZWE6 761 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 TMEM139Q8IV31 216 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 GPATCH11Q8N954 259 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 ANKRD53Q8N9V6 530 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 MAPK1IP1LQ8NDC0 245 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 TRPV3Q8NET8 790 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 NUBPLQ8TB37 319 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 ZPLD1Q8TCW7 415 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 SLC2A12Q8TD20 617 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 CD200R1Q8TD46 325 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 MFSD3Q96ES6 412 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 SNF8Q96H20 258 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 WFIKKN1Q96NZ8 548 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 OR4K3Q96R72 315 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 C19orf24Q9BVV8 132 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 OR8D2Q9GZM6 311 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 UBQLN3Q9H347 655 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 CXorf56Q9H5V9 222 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 YAE1D1Q9NRH1 226 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 RYDENQ9NUL5 291 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 ADAMTS6Q9UKP5 1117 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 CNOT11Q9UKZ1 510 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 CAMK2AQ9UQM7 478 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 MRPS33Q9Y291 106 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 DHRS7Q9Y394 339 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 MGAM2Q2M2H8 2515 aa12.66□□□□□ -0.38
CSNK1D-219ENST00000581660 NRDCO43847 1150 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 RCBTB2O95199 551 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 IFNA16P05015 189 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 PTMAP06454 111 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 ETS1P14921 441 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 CDK9P50750 372 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 ATP5J2P56134 94 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 EEF1A1P68104 462 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 REEP5Q00765 189 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 ASPHQ12797 758 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 SP140Q13342 867 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 CTBP1Q13363 440 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 DCST1Q5T197 706 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 C10orf62Q5T681 223 aaPredicted RBP12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 EEF1A1P5Q5VTE0 462 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 PEX26Q7Z412 305 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 CPNE9Q8IYJ1 553 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 SLC15A4Q8N697 577 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 OR56A3Q8NH54 315 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 SLC22A8Q8TCC7 542 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 TMEM171Q8WVE6 324 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 UGT2B28Q9BY64 529 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 PARVBQ9HBI1 364 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 EIF2B3Q9NR50 452 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 RAB6BQ9NRW1 208 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 AMFRQ9UKV5 643 aa12.65□□□□□ -0.38
CSNK1D-219ENST00000581660 MED12Q93074 2177 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 MED12LQ86YW9 2145 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 ANKRD33BA6NCL7 494 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 CYR61O00622 381 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 CTNSO60931 367 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 C8GP07360 202 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 THBS2P35442 1172 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 SLCO1A2P46721 670 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 NPY2RP49146 381 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 NR1H2P55055 460 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 DIO3P55073 304 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 BTN3A2P78410 334 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 RUNX1T1Q06455 604 aa12.64□□□□□ -0.39
CSNK1D-219ENST00000581660 RCAN2Q14206 197 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms