RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SKILP12757 684 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 RPL34P49207 117 aaKnown RBP2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 FHITP49789 147 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 PPIAP62937 165 aaKnown RBP2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 TSPY1Q01534 308 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 TFCP2Q12800 502 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 CRMP1Q14194 572 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 LTB4RQ15722 352 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 TWISTNBQ3B726 338 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 MARC1Q5VT66 337 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 SIGLEC15Q6ZMC9 328 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 METTL23Q86XA0 190 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 CACUL1Q86Y37 369 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 CCDC71Q8IV32 467 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 HSCBQ8IWL3 235 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 KLHL7Q8IXQ5 586 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 CLEC1AQ8NC01 280 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 ERGIC2Q96RQ1 377 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 MCCC1Q96RQ3 725 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 YTHDF1Q9BYJ9 559 aaKnown RBP2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 VIPAS39Q9H9C1 493 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 MRPL17Q9NRX2 175 aaKnown RBP2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 ZNF319Q9P2F9 582 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 GTF3C4Q9UKN8 822 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 GPR132Q9UNW8 380 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 SLC6A5Q9Y345 797 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 ZNF487B1APH4 448 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 M0R296 226 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 CDX4O14627 284 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 LETM1O95202 739 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 LY6G6DO95868 133 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 FHP07954 510 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 GIG44P09565 113 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 EZRP15311 586 aaKnown RBP2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 IFNAR1P17181 557 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 PPP2R1AP30153 589 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 CCND3P30281 292 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 SOAT1P35610 550 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 ALDH3B1P43353 468 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 IER3P46695 156 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 BRCC3P46736 316 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 NAAAQ02083 359 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 REP15Q6BDI9 236 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 PODNL1Q6PEZ8 512 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 PET117Q6UWS5 81 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 FAM47EQ6ZV65 393 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 SAMD12Q8N8I0 201 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 FLVCR1-AS1Q8TAF5 88 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 CKAP2Q8WWK9 683 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 CORO2AQ92828 525 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 ERO1AQ96HE7 468 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 B3GALT6Q96L58 329 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 C17orf62Q9BQA9 187 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 IDI2Q9BXS1 227 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 NT5DC2Q9H857 520 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 GPR173Q9NS66 373 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 FAM212BQ9NTI7 297 aaPredicted RBP2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 SLCO1C1Q9NYB5 712 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 RSPH14Q9UHP6 348 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 IKZF3Q9UKT9 509 aa2.36□□□□□ -2.03
SMCHD1-206ENST00000581631 DUSP11O75319 330 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 CSO75390 466 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 RHBDL1O75783 438 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 SUPT20HL2P0C7V6 817 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 ODC1P11926 461 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 MGMTP16455 207 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 HMGCLP35914 325 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 HMGCS2P54868 508 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 IGLV3-21P80748 117 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 AKAP17AQ02040 695 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 SLC3A1Q07837 685 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 PSMD6Q15008 389 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 ABRAXAS2Q15018 415 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 IQCCQ4KMZ1 466 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 UTF1Q5T230 341 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 MPP7Q5T2T1 576 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 LIPJQ5W064 366 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 OLFML2AQ68BL7 652 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 ALKBH5Q6P6C2 394 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 DCLRE1AQ6PJP8 1040 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 AQP12AQ8IXF9 295 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 SIX6OS1Q8N1H7 587 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 NHLRC2Q8NBF2 726 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 UBLCP1Q8WVY7 318 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 BADQ92934 168 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 PPP1R16AQ96I34 528 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 CDHR1Q96JP9 859 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 RASL10BQ96S79 203 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 CUEDC2Q9H467 287 aa2.35□□□□□ -2.03
SMCHD1-206ENST00000581631 GTPBP10A4D1E9 387 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-206ENST00000581631 ZSCAN5CA6NGD5 496 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-206ENST00000581631 H0YIG0 161 aa2.34□□□□□ -2.03
SMCHD1-206ENST00000581631 E2F3O00716 465 aa2.34□□□□□ -2.03
SMCHD1-206ENST00000581631 IFIT3O14879 490 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-206ENST00000581631 MCF2LO15068 1137 aa2.34□□□□□ -2.03
SMCHD1-206ENST00000581631 WDR46O15213 610 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-206ENST00000581631 OR6A2O95222 327 aa2.34□□□□□ -2.03
SMCHD1-206ENST00000581631 HSPA4LO95757 839 aa2.34□□□□□ -2.03
SMCHD1-206ENST00000581631 SCN1BQ07699 218 aa2.34□□□□□ -2.03
SMCHD1-206ENST00000581631 PTK6Q13882 451 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms