RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 CSF3RQ99062 836 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 ULBP3Q9BZM4 244 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 MKKSQ9NPJ1 570 aaPredicted RBP10.13□□□□□ -0.79
SS18-213ENST00000579640 SLC52A3Q9NQ40 469 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 GIMAP4Q9NUV9 329 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 UTS2RQ9UKP6 389 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 CES1P1Q9UKY3 287 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 TMEM184BQ9Y519 407 aaPredicted RBP10.13□□□□□ -0.79
SS18-213ENST00000579640 B3GALT1Q9Y5Z6 326 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 MAU2Q9Y6X3 613 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 KIF26BQ2KJY2 2108 aa10.13□□□□□ -0.79
SS18-213ENST00000579640 SYNDIG1LA6NDD5 238 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 C9JVG2 144 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 MEN1O00255 615 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 RNASET2O00584 256 aaKnown RBP10.12□□□□□ -0.79
SS18-213ENST00000579640 CLDN4O14493 209 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 DNAJB6O75190 326 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 CBX6O95503 412 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 LAMP1P11279 417 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 ITGAXP20702 1163 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 XCR1P46094 333 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 DGKQP52824 942 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 MAT1AQ00266 395 aaKnown RBP10.12□□□□□ -0.79
SS18-213ENST00000579640 NKAIN1Q4KMZ8 207 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 C3orf38Q5JPI3 329 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 FOXR1Q6PIV2 292 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 YTHDF3Q7Z739 585 aaKnown RBP10.12□□□□□ -0.79
SS18-213ENST00000579640 POU5F2Q8N7G0 328 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 SLC38A9Q8NBW4 561 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 DNAJB8Q8NHS0 232 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 DNAJB14Q8TBM8 379 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 FKBP10Q96AY3 582 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 PEX11GQ96HA9 241 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 SLC45A3Q96JT2 553 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 OR52E6Q96RD3 313 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 EFCAB1Q9HAE3 211 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 SLC35C2Q9NQQ7 365 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 DLL3Q9NYJ7 618 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 TRPC4Q9UBN4 977 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 SATB2Q9UPW6 733 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 ENTPD4Q9Y227 616 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 MMACHCQ9Y4U1 282 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 IGLV3-12A0A075B6K2 115 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 PRSS51A0A1B0GVH4 220 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 PGRMC2O15173 223 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 PDPK1O15530 556 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 UNC5CO95185 931 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 ALBP02768 609 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 FHP07954 510 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 T-ENOLP0DO92 83 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 CD1EP15812 388 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 NTSP30990 170 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 RASSF2P50749 326 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 HNRNPFP52597 415 aaKnown RBP10.12□□□□□ -0.79
SS18-213ENST00000579640 WNT3P56703 355 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 HSD17B7P56937 341 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 BIKQ13323 160 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 TLR1Q15399 786 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 CEBPEQ15744 281 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 MAPKAPK3Q16644 382 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 ZNF385BQ569K4 471 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 REP15Q6BDI9 236 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 OR4F3Q6IEY1 312 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 ANKRD26P1Q6NSI1 321 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 MMP21Q8N119 569 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 DPP10Q8N608 796 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 OR4K14Q8NGD5 310 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 ZFP28Q8NHY6 868 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.12□□□□□ -0.79
SS18-213ENST00000579640 PMEPA1Q969W9 287 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 VPS33AQ96AX1 596 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 EXOSC8Q96B26 276 aaKnown RBP10.12□□□□□ -0.79
SS18-213ENST00000579640 KLHL29Q96CT2 875 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 ZBED6CLQ96FA7 236 aaPredicted RBP10.12□□□□□ -0.79
SS18-213ENST00000579640 ITCHQ96J02 903 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 YIPF2Q9BWQ6 316 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 TGIF2Q9GZN2 237 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 POLR1BQ9H9Y6 1135 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 ACSS1Q9NUB1 689 aaPredicted RBP10.12□□□□□ -0.79
SS18-213ENST00000579640 C14orf105Q9NVL8 296 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 NDE1Q9NXR1 346 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 ZNF282Q9UDV7 671 aaPredicted RBP10.12□□□□□ -0.79
SS18-213ENST00000579640 BTNL2Q9UIR0 455 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 MAN2B2Q9Y2E5 1009 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 ZNF780BQ9Y6R6 833 aa10.12□□□□□ -0.79
SS18-213ENST00000579640 A0A1W2PNU3 283 aaPredicted RBP10.11□□□□□ -0.79
SS18-213ENST00000579640 GLOD5A6NK44 160 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 C9orf172C9J069 976 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 MRASO14807 208 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 CTNSO60931 367 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 SCN2BO60939 215 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 PRKRAO75569 313 aaKnown RBP10.11□□□□□ -0.79
SS18-213ENST00000579640 STK17BO94768 372 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 GPR75O95800 540 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 NPPAP01160 153 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 CD63P08962 238 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 ZNF28P17035 718 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 CSNK2A2P19784 350 aaPredicted RBP10.11□□□□□ -0.79
SS18-213ENST00000579640 FRKP42685 505 aaPredicted RBP10.11□□□□□ -0.79
SS18-213ENST00000579640 PHC1P78364 1004 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms