RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 PHF11Q9UIL8 331 aa10.73□□□□□ -0.69
SSH2-208ENST00000579040 ERVK-11Q9UQG0 969 aa10.73□□□□□ -0.69
SSH2-208ENST00000579040 MEMO1Q9Y316 297 aa10.73□□□□□ -0.69
SSH2-208ENST00000579040 ANGPTL3Q9Y5C1 460 aa10.73□□□□□ -0.69
SSH2-208ENST00000579040 PCDHGA11Q9Y5H2 935 aa10.73□□□□□ -0.69
SSH2-208ENST00000579040 TNPO3Q9Y5L0 923 aaKnown RBP10.73□□□□□ -0.69
SSH2-208ENST00000579040 LRBAP50851 2863 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 A0A096LPK6 155 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 ARHGAP10A1A4S6 786 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 HMX2A2RU54 273 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 TMEM200CA6NKL6 621 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 E9PLN8 166 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 RTCAO00442 366 aaKnown RBP10.72□□□□□ -0.69
SSH2-208ENST00000579040 PRKNO60260 465 aaPredicted RBP10.72□□□□□ -0.69
SSH2-208ENST00000579040 LDB3O75112 727 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 OR2J2O76002 312 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 CPN2P22792 545 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 HTR1EP28566 365 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 TYK2P29597 1187 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 PTGER1P34995 402 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 PTGER4P35408 488 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 RAP1GDS1P52306 607 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 HK2P52789 917 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 IRF9Q00978 393 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 SLC7A5Q01650 507 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 PCBP2Q15366 365 aaKnown RBP eCLIP10.72□□□□□ -0.693e-9■■■■■ 113.5
SSH2-208ENST00000579040 PFKFB4Q16877 469 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 WHAMMP3Q1A5X7 153 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 MDGA2Q7Z553 956 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 ZCCHC7Q8N3Z6 543 aaKnown RBP10.72□□□□□ -0.69
SSH2-208ENST00000579040 PSD4Q8NDX1 1056 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 OR5L2Q8NGL0 311 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 HUS1BQ8NHY5 278 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 SLC2A12Q8TD20 617 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 TANKQ92844 425 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 ANKRD9Q96BM1 317 aaPredicted RBP10.72□□□□□ -0.69
SSH2-208ENST00000579040 RASL10BQ96S79 203 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 VKORC1Q9BQB6 163 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 FUT8Q9BYC5 575 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 OR8D2Q9GZM6 311 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 OR51B5Q9H339 312 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 ACTR8Q9H981 624 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 DMRT3Q9NQL9 472 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 RYDENQ9NUL5 291 aaKnown RBP10.72□□□□□ -0.69
SSH2-208ENST00000579040 COPS7AQ9UBW8 275 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 APCP25054 2843 aa10.72□□□□□ -0.69
SSH2-208ENST00000579040 ENO4A6NNW6 628 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 C17orf105B2RV13 164 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 H0YIV9 168 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 PLPP1O14494 284 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 DYRK3O43781 588 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 ALDOAP04075 364 aaKnown RBP10.71□□□□□ -0.69
SSH2-208ENST00000579040 TNNI3P19429 210 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 PTX3P26022 381 aaPredicted RBP10.71□□□□□ -0.69
SSH2-208ENST00000579040 GRNP28799 593 aaKnown RBP10.71□□□□□ -0.69
SSH2-208ENST00000579040 TLX1P31314 330 aaPredicted RBP10.71□□□□□ -0.69
SSH2-208ENST00000579040 SOX3P41225 446 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 STT3AP46977 705 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 RNF4P78317 190 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 HSF1Q00613 529 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 PLIN5Q00G26 463 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 TNFRSF17Q02223 184 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 SLAMF1Q13291 335 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 DDX39BQ13838 428 aaKnown RBP10.71□□□□□ -0.69
SSH2-208ENST00000579040 UAP1Q16222 522 aaPredicted RBP10.71□□□□□ -0.69
SSH2-208ENST00000579040 OPN5Q6U736 354 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 RTL4Q6ZR62 310 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 RGS9BPQ6ZS82 235 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 TAOK1Q7L7X3 1001 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 GPR180Q86V85 440 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 DOLPP1Q86YN1 238 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 MYLK4Q86YV6 388 aaPredicted RBP10.71□□□□□ -0.69
SSH2-208ENST00000579040 L3MBTL4Q8NA19 623 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 GOLM1Q8NBJ4 401 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 FAM57AQ8TBR7 257 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 AGAP11Q8TF27 550 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 MRRFQ96E11 262 aaKnown RBP10.71□□□□□ -0.69
SSH2-208ENST00000579040 ART5Q96L15 291 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 GPR78Q96P69 363 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 DGAT2Q96PD7 388 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 DMRTA2Q96SC8 542 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 MTERF1Q99551 399 aaKnown RBP10.71□□□□□ -0.69
SSH2-208ENST00000579040 PELOQ9BRX2 385 aaKnown RBP10.71□□□□□ -0.69
SSH2-208ENST00000579040 RPF2Q9H7B2 306 aaKnown RBP10.71□□□□□ -0.69
SSH2-208ENST00000579040 PLSCR2Q9NRY7 297 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 LYARQ9NX58 379 aaKnown RBP10.71□□□□□ -0.69
SSH2-208ENST00000579040 PSD3Q9NYI0 1048 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 NINJ2Q9NZG7 142 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 TMCO1Q9UM00 188 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 PPT2Q9UMR5 302 aa10.71□□□□□ -0.69
SSH2-208ENST00000579040 NINQ8N4C6 2090 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 MYOCOSA0A1B0GUC4 107 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 ACOT7O00154 380 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 WWP2O00308 870 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 FOXE1O00358 373 aaPredicted RBP10.7□□□□□ -0.7
SSH2-208ENST00000579040 SAP18O00422 153 aaKnown RBP10.7□□□□□ -0.7
SSH2-208ENST00000579040 HS6ST1O60243 411 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 FGF17O60258 216 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 SH3BGRLO75368 114 aa10.7□□□□□ -0.7
SSH2-208ENST00000579040 URI1O94763 535 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms