RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 LIFP15018 202 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ALOX15P16050 662 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 IL1RNP18510 177 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 TAC1P20366 129 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 BGNP21810 368 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ATP5A1P25705 553 aaKnown RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ITPKBP27987 946 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 SERPINB3P29508 390 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 SERPINB5P36952 375 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 PIK3CBP42338 1070 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 OR1D4P47884 311 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 NEK2P51955 445 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ARFIP1P53367 373 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 PKNOX1P55347 436 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 HNRNPH2P55795 449 aaKnown RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 RPS13P62277 151 aaKnown RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CYP4F2P78329 520 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 MAT1AQ00266 395 aaKnown RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 RHAGQ02094 409 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 IRF8Q02556 426 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 TLE3Q04726 772 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF33BQ06732 778 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 FOXM1Q08050 763 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ABHD18Q0P651 414 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 BST1Q10588 318 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 LAPTM5Q13571 262 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CUL3Q13618 768 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 TSTA3Q13630 321 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 IL10RAQ13651 578 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 RUNX2Q13950 521 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 GRM7Q14831 915 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ABRAXAS2Q15018 415 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 NCF4Q15080 339 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 NKG7Q16617 165 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 PRSS53Q2L4Q9 553 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 TOR1AIP1Q5JTV8 583 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 MANEAQ5SRI9 462 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 TMTC4Q5T4D3 741 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ARHGAP21Q5T5U3 1957 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 DEPDC1Q5TB30 811 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 YOD1Q5VVQ6 348 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 KHDRBS2Q5VWX1 349 aaKnown RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 FRG2Q64ET8 278 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CLEC6AQ6EIG7 209 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CGB2Q6NT52 195 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 MED27Q6P2C8 311 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 GALNT18Q6P9A2 607 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 PCSK4Q6UW60 755 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 RGS9BPQ6ZS82 235 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 GPRIN3Q6ZVF9 776 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 OVCH1Q7RTY7 1134 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CLNKQ7Z7G1 428 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CUZD1Q86UP6 607 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 VASH2Q86V25 355 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 TMEM126BQ8IUX1 230 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 SCUBE1Q8IWY4 988 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 NLGN4XQ8N0W4 816 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CA13Q8N1Q1 262 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 METTL4Q8N3J2 472 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 NINQ8N4C6 2090 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF781Q8N8C0 355 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CDYL2Q8N8U2 506 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 NLGN4YQ8NFZ3 816 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 OR2L5Q8NG80 312 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 OR5T3Q8NGG3 340 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 OR9A4Q8NGU2 314 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ZCCHC10Q8TBK6 192 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC13A3Q8WWT9 602 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ZCCHC14Q8WYQ9 949 aaKnown RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 FGF11Q92914 225 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 UCN3Q969E3 161 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 GAL3ST3Q96A11 431 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 FKBP10Q96AY3 582 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CNDP1Q96KN2 507 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 C3orf30Q96M34 536 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 FRG2BQ96QU4 278 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 F2RL3Q96RI0 385 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CSF3RQ99062 836 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 HBEGFQ99075 208 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 WDR77Q9BQA1 342 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 TRMOQ9BU70 441 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 SORBS1Q9BX66 1292 aaKnown RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ULBP3Q9BZM4 244 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 TGIF2Q9GZN2 237 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CHST8Q9H2A9 424 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 DDX31Q9H8H2 851 aaKnown RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ACTR8Q9H981 624 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ACTR5Q9H9F9 607 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 BRF2Q9HAW0 419 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 THSD1Q9NS62 852 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ARGLU1Q9NWB6 273 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CTSFQ9UBX1 484 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ZDHHC2Q9UIJ5 367 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 MID2Q9UJV3 735 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CROTQ9UKG9 612 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 SRPK3Q9UPE1 567 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ASB4Q9Y574 426 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 TIMM22Q9Y584 194 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 DNAJC15Q9Y5T4 150 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 MRPS18BQ9Y676 258 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms