RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 IGFL2Q6UWQ7 119 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 HSDL2Q6YN16 418 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 ZNF793Q6ZN11 406 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 TDRPQ86YL5 185 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 CRLF3Q8IUI8 442 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 SRRM1Q8IYB3 904 aaKnown RBP6.13□□□□□ -1.43
TRAF4-213ENST00000578917 BEST3Q8N1M1 668 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 TMEM151AQ8N4L1 468 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 KIF2BQ8N4N8 673 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 AMER2Q8N7J2 671 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 BCORP1Q8N888 145 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 Q8NA96 180 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 GALNT11Q8NCW6 608 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 TMEM52Q8NDY8 209 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 OR14A16Q8NHC5 309 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 RDH11Q8TC12 318 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 GRHL3Q8TE85 626 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 ZNF483Q8TF39 744 aaPredicted RBP6.13□□□□□ -1.43
TRAF4-213ENST00000578917 NCLNQ969V3 563 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 TMEM125Q96AQ2 219 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 MIB2Q96AX9 1013 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 PPWD1Q96BP3 646 aaKnown RBP6.13□□□□□ -1.43
TRAF4-213ENST00000578917 VMP1Q96GC9 406 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 DGAT2Q96PD7 388 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 SMC6Q96SB8 1091 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 CSF3RQ99062 836 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 MRPL1Q9BYD6 325 aaKnown RBP6.13□□□□□ -1.43
TRAF4-213ENST00000578917 ROPN1BQ9BZX4 212 aaPredicted RBP6.13□□□□□ -1.43
TRAF4-213ENST00000578917 OR8D2Q9GZM6 311 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 EPB41L4BQ9H329 900 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 ROPN1Q9HAT0 212 aaPredicted RBP6.13□□□□□ -1.43
TRAF4-213ENST00000578917 ZBTB26Q9HCK0 441 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 MID1IP1Q9NPA3 183 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 ADAP2Q9NPF8 381 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 KLHL1Q9NR64 748 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 FARSBQ9NSD9 589 aaKnown RBP6.13□□□□□ -1.43
TRAF4-213ENST00000578917 LYARQ9NX58 379 aaKnown RBP6.13□□□□□ -1.43
TRAF4-213ENST00000578917 PSD3Q9NYI0 1048 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 KCMF1Q9P0J7 381 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 LRFN1Q9P244 771 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 VPS29Q9UBQ0 182 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 VTI1BQ9UEU0 232 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 MID2Q9UJV3 735 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 PSME2Q9UL46 239 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 ERVK-11Q9UQG0 969 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 TSC22D4Q9Y3Q8 395 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 ATG4BQ9Y4P1 393 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 CSAG2Q9Y5P2 127 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 CENPEQ02224 2701 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 ANKRD12Q6UB98 2062 aa6.13□□□□□ -1.43
TRAF4-213ENST00000578917 IGKV3D-11A0A0A0MRZ8 115 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 A0A1W2PR48 441 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 ANKUB1A6NFN9 424 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 GABRR3A8MPY1 467 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 TCP11X1B4DZS4 312 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 MANBAO00462 879 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 RGS16O15492 202 aaPredicted RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 PRAMEF2O60811 474 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 UTP20O75691 2785 aaKnown RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 AGFG2O95081 481 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 RASAL1O95294 804 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 ETHE1O95571 254 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 GPR75O95800 540 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 CRYABP02511 175 aaKnown RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 PROCP04070 461 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 RPS17P08708 135 aaKnown RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 SBK3P0C264 359 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 NR2F6P10588 404 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 NEFHP12036 1026 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 ALOX15P16050 662 aaPredicted RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 PIK3R1P27986 724 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 BSGP35613 385 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 SOX11P35716 441 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 ALDH9A1P49189 494 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 NAA20P61599 178 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 PLIN5Q00G26 463 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 FOLH1Q04609 750 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 BTKQ06187 659 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 TRAF3Q13114 568 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 TUBA3CQ13748 450 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 ZNF267Q14586 743 aaPredicted RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 TERF2Q15554 542 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 OR1C1Q15619 314 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 EIF2S3LQ2VIR3 472 aaKnown RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 KRT71Q3SY84 523 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 ZNF766Q5HY98 468 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 FHL5Q5TD97 284 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 C18orf63Q68DL7 685 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 SPINK14Q6IE38 97 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 H3F3CQ6NXT2 135 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 LETMD1Q6P1Q0 360 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 TUBA3EQ6PEY2 450 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 SCIMPQ6UWF3 145 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 ZYG11AQ6WRX3 759 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 SCUBE1Q8IWY4 988 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 ZCCHC7Q8N3Z6 543 aaKnown RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 RIBC1Q8N443 379 aaPredicted RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 GBP7Q8N8V2 638 aaPredicted RBP6.12□□□□□ -1.43
TRAF4-213ENST00000578917 TMEM178AQ8NBL3 297 aa6.12□□□□□ -1.43
TRAF4-213ENST00000578917 FAM98AQ8NCA5 519 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms