RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 MTRF1LQ9UGC7 380 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-227ENST00000575560 IKZF3Q9UKT9 509 aa9.19□□□□□ -0.94
CALCOCO2-227ENST00000575560 MRPS33Q9Y291 106 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-227ENST00000575560 DYRK1BQ9Y463 629 aa9.19□□□□□ -0.94
CALCOCO2-227ENST00000575560 KCNE2Q9Y6J6 123 aa9.19□□□□□ -0.94
CALCOCO2-227ENST00000575560 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.19□□□□□ -0.94
CALCOCO2-227ENST00000575560 CSPG4Q6UVK1 2322 aa9.19□□□□□ -0.94
CALCOCO2-227ENST00000575560 PABPN1LA6NDY0 278 aaKnown RBP9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 FAM171A2A8MVW0 826 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 KDM4EB2RXH2 506 aaPredicted RBP9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 GOLGA8MH3BSY2 632 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 ERI3O43414 337 aaKnown RBP9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 B3GALT2O43825 422 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 NRDCO43847 1150 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 GOSR1O95249 250 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 KRT14P02533 472 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 CCDC175P0C221 793 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 C1GALT1C1LP0DN25 315 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 SAT1P21673 171 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 PGGT1BP53609 377 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 DCAF7P61962 342 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 NKX6-1P78426 367 aaPredicted RBP9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 EFTUD2Q15029 972 aaKnown RBP eCLIP9.18□□□□□ -0.948e-7■■□□□ 13.2
CALCOCO2-227ENST00000575560 ADPRMQ3LIE5 342 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 SHEQ5VZ18 495 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 LYPD8Q6UX82 237 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 TMIGD1Q6UXZ0 262 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 SLCO4C1Q6ZQN7 724 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 CXorf67Q86X51 503 aaPredicted RBP9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 KIF18BQ86Y91 864 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 TTLQ8NG68 377 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 OR2L5Q8NG80 312 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 SLC2A12Q8TD20 617 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 PAQR8Q8TEZ7 354 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 ZNF721Q8TF20 911 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 NUDT8Q8WV74 236 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 SERINC2Q96SA4 455 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 CSF3RQ99062 836 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 TIMP4Q99727 224 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 OR8D2Q9GZM6 311 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 EXO5Q9H790 373 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 ZFP64Q9NPA5 681 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 BEX4Q9NWD9 120 aaPredicted RBP9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 QPCTLQ9NXS2 382 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 GUCA1BQ9UMX6 200 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 DAPP1Q9UN19 280 aa9.18□□□□□ -0.94
CALCOCO2-227ENST00000575560 ARHGAP21Q5T5U3 1957 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 ATRQ13535 2644 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 A0A088AWK7 358 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 A0A1W2PPR1 153 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 C2orf72A6NCS6 295 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 LRRC3CA6NJW4 275 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 CLCA1A8K7I4 914 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 C17orf105B2RV13 164 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 H2AFYO75367 372 aaKnown RBP9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 CLEC3AO75596 197 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 ETHE1O95571 254 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 GNAZP19086 355 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 ZNF10P21506 573 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 GSTM2P28161 218 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 ZNF136P52737 540 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 PLA2G16P53816 162 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 WNT3P56703 355 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 SORDQ00796 357 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 TBL3Q12788 808 aaKnown RBP9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 ASPHQ12797 758 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 SERTAD2Q14140 314 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 ACSF3Q4G176 576 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 FBXW10Q5XX13 1052 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 TTC27Q6P3X3 843 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 ABHD17CQ6PCB6 329 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 VN1R5Q7Z5H4 357 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 GALNT7Q86SF2 657 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 LACC1Q8IV20 430 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 CNTN4Q8IWV2 1026 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 SLC15A4Q8N697 577 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 NAT8LQ8N9F0 302 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 SPATA3Q8NHX4 192 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 LINC01560Q8TB33 94 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 KIAA1191Q96A73 305 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 REXO4Q9GZR2 422 aaKnown RBP9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 SLC6A15Q9H2J7 730 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 NT5DC2Q9H857 520 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 ZNF395Q9H8N7 513 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 PRDM7Q9NQW5 492 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 CNIH4Q9P003 139 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 JKAMPQ9P055 326 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 BOKQ9UMX3 212 aaPredicted RBP9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 VWA7Q9Y334 891 aa9.17□□□□□ -0.94
CALCOCO2-227ENST00000575560 STAB1Q9NY15 2570 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 LDB3O75112 727 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 IL2RAP01589 272 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 C1QAP02745 245 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 HRGP04196 525 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 IGKV3-11P04433 115 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 TNNI3P19429 210 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 CERS1P27544 350 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 TRPC1P48995 793 aa9.16□□□□□ -0.94
CALCOCO2-227ENST00000575560 MTTPP55157 894 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms