RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 SNRNP40Q96DI7 357 aaKnown RBP9.98□□□□□ -0.81
LITAF-216ENST00000574848 THOC3Q96J01 351 aaKnown RBP9.98□□□□□ -0.81
LITAF-216ENST00000574848 LMF1Q96S06 567 aa9.98□□□□□ -0.81
LITAF-216ENST00000574848 SERPINI1Q99574 410 aa9.98□□□□□ -0.81
LITAF-216ENST00000574848 CADM1Q9BY67 442 aaKnown RBP9.98□□□□□ -0.81
LITAF-216ENST00000574848 VN1R1Q9GZP7 353 aa9.98□□□□□ -0.81
LITAF-216ENST00000574848 ZNF385DQ9H6B1 395 aa9.98□□□□□ -0.81
LITAF-216ENST00000574848 EPS8L2Q9H6S3 715 aa9.98□□□□□ -0.81
LITAF-216ENST00000574848 PELI2Q9HAT8 420 aa9.98□□□□□ -0.81
LITAF-216ENST00000574848 ZBTB26Q9HCK0 441 aa9.98□□□□□ -0.81
LITAF-216ENST00000574848 SEMA4BQ9NPR2 832 aaPredicted RBP9.98□□□□□ -0.81
LITAF-216ENST00000574848 OPTCQ9UBM4 332 aa9.98□□□□□ -0.81
LITAF-216ENST00000574848 CSAG2Q9Y5P2 127 aa9.98□□□□□ -0.81
LITAF-216ENST00000574848 PRRC2CQ9Y520 2896 aaKnown RBP9.98□□□□□ -0.81
LITAF-216ENST00000574848 USP9YO00507 2555 aaPredicted RBP9.97□□□□□ -0.81
LITAF-216ENST00000574848 E2F3O00716 465 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 UBFD1O14562 309 aaKnown RBP9.97□□□□□ -0.81
LITAF-216ENST00000574848 C8orf89P0DMQ9 161 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 IDO1P14902 403 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 EPB42P16452 691 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 PCSK2P16519 638 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 LBPP18428 481 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 IL1RNP18510 177 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 IL10P22301 178 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 CXCR2P25025 360 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 HMOX2P30519 316 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 HNRNPH1P31943 449 aaKnown RBP9.97□□□□□ -0.81
LITAF-216ENST00000574848 AHRP35869 848 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 XCR1P46094 333 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 CPA2P48052 419 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 SLC6A12P48065 614 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 CCNG1P51959 295 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 RAP1GDS1P52306 607 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 AP2B1P63010 937 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 MAT1AQ00266 395 aaKnown RBP9.97□□□□□ -0.81
LITAF-216ENST00000574848 EEF1A2Q05639 463 aaKnown RBP9.97□□□□□ -0.81
LITAF-216ENST00000574848 GTF2H2Q13888 395 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 GSTA3Q16772 222 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 CLEC6AQ6EIG7 209 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 NIPAL1Q6NVV3 410 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 GTF2H2CQ6P1K8 395 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 LRRC70Q7Z2Q7 622 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 SPATA19Q7Z5L4 167 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 NET1Q7Z628 596 aaPredicted RBP9.97□□□□□ -0.81
LITAF-216ENST00000574848 SCUBE1Q8IWY4 988 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 KCT2Q8NC54 265 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 FAM13CQ8NE31 585 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 OR51Q1Q8NH59 317 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 MOCOSQ96EN8 888 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 IMMP1LQ96LU5 166 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 OR1F2PQ96R84 312 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 CD244Q9BZW8 370 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 RNF32Q9H0A6 362 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 SPNS1Q9H2V7 528 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 EFCAB1Q9HAE3 211 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 ANKHQ9HCJ1 492 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 TMEM45AQ9NWC5 275 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 BCAP29Q9UHQ4 241 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 PTBP2Q9UKA9 531 aaKnown RBP9.97□□□□□ -0.81
LITAF-216ENST00000574848 MKL2Q9ULH7 1088 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 PRPF19Q9UMS4 504 aaKnown RBP9.97□□□□□ -0.81
LITAF-216ENST00000574848 DNAJC15Q9Y5T4 150 aa9.97□□□□□ -0.81
LITAF-216ENST00000574848 COPG1Q9Y678 874 aaKnown RBP9.97□□□□□ -0.81
LITAF-216ENST00000574848 BBIP1A8MTZ0 92 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 K7EPI3 171 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 PSMD12O00232 456 aaPredicted RBP9.96□□□□□ -0.82
LITAF-216ENST00000574848 PIP5K1BO14986 540 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 NDUFS4O43181 175 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 CCNT2O60583 730 aaKnown RBP9.96□□□□□ -0.82
LITAF-216ENST00000574848 GALR3O60755 368 aaPredicted RBP9.96□□□□□ -0.82
LITAF-216ENST00000574848 RDH16O75452 317 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 STK16O75716 305 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 KLHL18O94889 574 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 WDR47O94967 919 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 GUCA1CO95843 209 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 STATHP02808 62 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 JUNP05412 331 aaKnown RBP9.96□□□□□ -0.82
LITAF-216ENST00000574848 AGTR2P50052 363 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 SKP1P63208 163 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 MEF2AQ02078 507 aaPredicted RBP9.96□□□□□ -0.82
LITAF-216ENST00000574848 MAD2L1Q13257 205 aaPredicted RBP9.96□□□□□ -0.82
LITAF-216ENST00000574848 ART3Q13508 389 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 ZNF169Q14929 603 aaPredicted RBP9.96□□□□□ -0.82
LITAF-216ENST00000574848 RPS6KA2Q15349 733 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 TLR1Q15399 786 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 INAQ16352 499 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 UGT3A2Q3SY77 523 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 CATSPEREQ5SY80 951 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 OGFOD2Q6N063 350 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 RPUSD3Q6P087 351 aaKnown RBP9.96□□□□□ -0.82
LITAF-216ENST00000574848 RNF165Q6ZSG1 346 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 LARP4Q71RC2 724 aaKnown RBP eCLIP9.96□□□□□ -0.82
LITAF-216ENST00000574848 RPS27LQ71UM5 84 aaKnown RBP9.96□□□□□ -0.82
LITAF-216ENST00000574848 GOLGA7Q7Z5G4 137 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 PACS2Q86VP3 889 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 THOC6Q86W42 341 aaKnown RBP9.96□□□□□ -0.82
LITAF-216ENST00000574848 SNX32Q86XE0 403 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 TBC1D19Q8N5T2 526 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 ZNF740Q8NDX6 193 aa9.96□□□□□ -0.82
LITAF-216ENST00000574848 ZCCHC10Q8TBK6 192 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms