RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MTERF3Q96E29 417 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 NLNQ9BYT8 704 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 SPNS1Q9H2V7 528 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 CCDC177Q9NQR7 707 aaPredicted RBP14.9□□□□□ -0.02
NUP88-207ENST00000573584 ASAH2Q9NR71 780 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 SEC14L4Q9UDX3 406 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 GRIP1Q9Y3R0 1128 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 PCDHGB2Q9Y5G2 931 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 V9GYH0 126 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 LINC00854A0A1B0GVQ3 168 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 WASH3PC4AMC7 463 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 WWP2O00308 870 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 OR10H3O60404 316 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 TIMP2P16035 220 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 UQCRC2P22695 453 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 AZGP1P25311 298 aaKnown RBP14.9□□□□□ -0.02
NUP88-207ENST00000573584 CRYBB2P43320 205 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 RUNX1T1Q06455 604 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 ILKQ13418 452 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 NCF4Q15080 339 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 SEC23BQ15437 767 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 BAK1Q16611 211 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 POM121L1PQ3SYA9 428 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 MEDAGQ5VYS4 303 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 SLC30A8Q8IWU4 369 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 LAX1Q8IWV1 398 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 CFAP206Q8IYR0 622 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 TP53INP1Q96A56 240 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 WDR34Q96EX3 536 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 TRMT61AQ96FX7 289 aaKnown RBP14.9□□□□□ -0.02
NUP88-207ENST00000573584 CXorf36Q9H7Y0 433 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 SRRDQ9UH36 339 aa14.9□□□□□ -0.02
NUP88-207ENST00000573584 LAMA2P24043 3122 aaKnown RBP14.9□□□□□ -0.02
NUP88-207ENST00000573584 TEX28O15482 410 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 XPAP23025 273 aaPredicted RBP14.89□□□□□ -0.03
NUP88-207ENST00000573584 RFX2P48378 723 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 PCM1Q15154 2024 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 TNFAIP8L2Q6P589 184 aaPredicted RBP14.89□□□□□ -0.03
NUP88-207ENST00000573584 CASP12Q6UXS9 341 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 RAB43Q86YS6 212 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 ZNF740Q8NDX6 193 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 SLC38A5Q8WUX1 472 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 AP2M1Q96CW1 435 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 PDXPQ96GD0 296 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 ALPK3Q96L96 1907 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 ZNF558Q96NG5 402 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 MND1Q9BWT6 205 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 SORBS1Q9BX66 1292 aaKnown RBP14.89□□□□□ -0.03
NUP88-207ENST00000573584 SLC46A2Q9BY10 475 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 POLR2J2Q9GZM3 115 aaKnown RBP14.89□□□□□ -0.03
NUP88-207ENST00000573584 TAAR2Q9P1P5 351 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 RPL36Q9Y3U8 105 aaKnown RBP14.89□□□□□ -0.03
NUP88-207ENST00000573584 SNX11Q9Y5W9 270 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 A6NL46 340 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 BCHEP06276 602 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 TGM4P49221 684 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 DCST1Q5T197 706 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 WDR53Q7Z5U6 358 aaPredicted RBP14.89□□□□□ -0.03
NUP88-207ENST00000573584 SLC39A11Q8N1S5 342 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 RAET1EQ8TD07 263 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 APOBEC4Q8WW27 367 aaKnown RBP14.89□□□□□ -0.03
NUP88-207ENST00000573584 STUB1Q9UNE7 303 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 CCL26Q9Y258 94 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 NOX1Q9Y5S8 564 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 FAM172BPA6NC97 362 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 ZNF670-ZNF695F2Z2N8 137 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 SEMA3DO95025 777 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 ENDOUP21128 410 aaKnown RBP14.89□□□□□ -0.03
NUP88-207ENST00000573584 CA8P35219 290 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 ZNF79Q15937 498 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 FAM92BQ6ZTR7 304 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 BCDIN3DQ7Z5W3 292 aaKnown RBP14.89□□□□□ -0.03
NUP88-207ENST00000573584 TECPR1Q7Z6L1 1165 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 TCEANCQ8N8B7 351 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 SLC5A11Q8WWX8 675 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 TIGARQ9NQ88 270 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 SPATA7Q9P0W8 599 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 MGAT4BQ9UQ53 548 aa14.89□□□□□ -0.03
NUP88-207ENST00000573584 ANKDD1BA6NHY2 528 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 PQBP1O60828 265 aaKnown RBP14.88□□□□□ -0.03
NUP88-207ENST00000573584 SEMA7AO75326 666 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 CYP17A1P05093 508 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 HBQ1P09105 142 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 XKP51811 444 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 MXD1Q05195 221 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 ZFP69Q49AA0 526 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 TCTN3Q6NUS6 607 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 NXPE4Q6UWF7 544 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 GPR65Q8IYL9 337 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 HORMAD2Q8N7B1 307 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 SNX18Q96RF0 628 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 SGPP1Q9BX95 441 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 SSR3Q9UNL2 185 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 MYOFQ9NZM1 2061 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 A8MV72 311 aaPredicted RBP14.88□□□□□ -0.03
NUP88-207ENST00000573584 SH3BP5O60239 455 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 IL7P13232 177 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 ELAVL4P26378 380 aaKnown RBP14.88□□□□□ -0.03
NUP88-207ENST00000573584 DGKGP49619 791 aa14.88□□□□□ -0.03
NUP88-207ENST00000573584 PSPHP78330 225 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms