RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 SHISA5Q8N114 240 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 FAM47BQ8NA70 645 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 TEX19Q8NA77 164 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 METTL2AQ96IZ6 378 aaKnown RBP12.72□□□□□ -0.37
RPAIN-213ENST00000573577 PTCHD1Q96NR3 888 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 CCT7Q99832 543 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 MAPKAP1Q9BPZ7 522 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 SORBS1Q9BX66 1292 aaKnown RBP12.72□□□□□ -0.37
RPAIN-213ENST00000573577 ZNF717Q9BY31 904 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-213ENST00000573577 ACPTQ9BZG2 426 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 ILKAPQ9H0C8 392 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-213ENST00000573577 WDR41Q9HAD4 459 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 PRDM9Q9NQV7 894 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 PRTFDC1Q9NRG1 225 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 KCMF1Q9P0J7 381 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 FBXW2Q9UKT8 454 aa12.72□□□□□ -0.37
RPAIN-213ENST00000573577 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-213ENST00000573577 MED13Q9UHV7 2174 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 LOC102723996A0A087X1L8 192 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 NSG1A0A0A6YYJ2 146 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 FAM227AF5H4B4 570 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 CYR61O00622 381 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 ATP8B1O43520 1251 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 RGS14O43566 566 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 EEDO75530 441 aaKnown RBP12.71□□□□□ -0.37
RPAIN-213ENST00000573577 KLK1P06870 262 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 FAM58BPP0C7Q3 252 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 COX6A1P12074 109 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 SERPINB3P29508 390 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 PPP2R1BP30154 601 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 MAPK12P53778 367 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 AP2B1P63010 937 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 HMGCS1Q01581 520 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 TBL3Q12788 808 aaKnown RBP12.71□□□□□ -0.37
RPAIN-213ENST00000573577 SLC13A2Q13183 592 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 SPDYAQ5MJ70 313 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 MRM1Q6IN84 353 aaKnown RBP12.71□□□□□ -0.37
RPAIN-213ENST00000573577 NDUFAF7Q7L592 441 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 HPS6Q86YV9 775 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 DDIASQ8IXT1 998 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 C1orf52Q8N6N3 182 aaKnown RBP12.71□□□□□ -0.37
RPAIN-213ENST00000573577 CHTF18Q8WVB6 975 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 EPN3Q9H201 632 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 ZNF160Q9HCG1 818 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 TNFRSF12AQ9NP84 129 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 RIC8BQ9NVN3 520 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 ZNF446Q9NWS9 450 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 C5AR2Q9P296 337 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 RAP2CQ9Y3L5 183 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 NUP210LQ5VU65 1888 aa12.71□□□□□ -0.37
RPAIN-213ENST00000573577 IGHV1-45A0A0A0MS14 117 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 J3QKU1 62 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 PROM1O43490 865 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 DPM1O60762 260 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 CTNSO60931 367 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 MYO1DO94832 1006 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 NR2F6P10588 404 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 ICAM2P13598 275 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 TPP2P29144 1249 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-213ENST00000573577 GSTM5P46439 218 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 TRA2BP62995 288 aaKnown RBP12.7□□□□□ -0.38
RPAIN-213ENST00000573577 PPP2R2AP63151 447 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 TNFRSF17Q02223 184 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 EEF1A2Q05639 463 aaKnown RBP12.7□□□□□ -0.38
RPAIN-213ENST00000573577 ACTN3Q08043 901 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-213ENST00000573577 Q0VFX4 171 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 BIKQ13323 160 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 COLEC12Q5KU26 742 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 IRAK1BP1Q5VVH5 260 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 SCIMPQ6UWF3 145 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 CPEB2Q7Z5Q1 589 aaKnown RBP12.7□□□□□ -0.38
RPAIN-213ENST00000573577 ANKRD37Q7Z713 158 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 SCUBE1Q8IWY4 988 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 PARP9Q8IXQ6 854 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 FAM76AQ8TAV0 307 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 AGR3Q8TD06 166 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 TWIST2Q8WVJ9 160 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 DYDC1Q8WWB3 177 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 TANKQ92844 425 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 CSF3RQ99062 836 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 TUBB6Q9BUF5 446 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 LHPPQ9H008 270 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 ZNF700Q9H0M5 742 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 ZNF552Q9H707 407 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-213ENST00000573577 RPF2Q9H7B2 306 aaKnown RBP12.7□□□□□ -0.38
RPAIN-213ENST00000573577 MANSC1Q9H8J5 431 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 THAP1Q9NVV9 213 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 ZDHHC2Q9UIJ5 367 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 MCM8Q9UJA3 840 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 ASB4Q9Y574 426 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 DNAJC15Q9Y5T4 150 aa12.7□□□□□ -0.38
RPAIN-213ENST00000573577 GCN1Q92616 2671 aaKnown RBP12.69□□□□□ -0.38
RPAIN-213ENST00000573577 GNG14A0A1W2PPG7 69 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 OR2W5A6NFC9 320 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 NPIPB8E9PQR5 432 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 ITM2AO43736 263 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 TMPRSS11DO60235 418 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 PCDH7O60245 1069 aa12.69□□□□□ -0.38
RPAIN-213ENST00000573577 LYPLA1O75608 230 aaPredicted RBP12.69□□□□□ -0.38
RPAIN-213ENST00000573577 GBAP04062 536 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms