RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 DMDP11532 3685 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 GLOD5A6NK44 160 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 H0YIG0 161 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 NVLO15381 856 aaKnown RBP12.92□□□□□ -0.34
CCDC40-209ENST00000573474 CHST10O43529 356 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 PRKRAO75569 313 aaKnown RBP12.92□□□□□ -0.34
CCDC40-209ENST00000573474 PDE5AO76074 875 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 C6orf47O95873 294 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 GSNP06396 782 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 EFNA1P20827 205 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-209ENST00000573474 ME2P23368 584 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 NTSP30990 170 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 CSTF2P33240 577 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC40-209ENST00000573474 FRKP42685 505 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-209ENST00000573474 GCGRP47871 477 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 MANFP55145 182 aaKnown RBP12.92□□□□□ -0.34
CCDC40-209ENST00000573474 RAB38P57729 211 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 CEACAM7Q14002 265 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 OR52E8Q6IFG1 317 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 DNAJC14Q6Y2X3 702 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-209ENST00000573474 BPHLQ86WA6 291 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-209ENST00000573474 SAMD14Q8IZD0 417 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-209ENST00000573474 FAM13CQ8NE31 585 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 OR5T3Q8NGG3 340 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 ADAMTS18Q8TE60 1221 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 TANKQ92844 425 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 MVB12AQ96EY5 273 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 MMABQ96EY8 250 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-209ENST00000573474 BBS4Q96RK4 519 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 NDC1Q9BTX1 674 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 RPF2Q9H7B2 306 aaKnown RBP12.92□□□□□ -0.34
CCDC40-209ENST00000573474 SLC6A13Q9NSD5 602 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 GIMAP4Q9NUV9 329 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 C5AR2Q9P296 337 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 ZNF282Q9UDV7 671 aaPredicted RBP12.92□□□□□ -0.34
CCDC40-209ENST00000573474 CD300AQ9UGN4 299 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 SLC7A8Q9UHI5 535 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 VPS4AQ9UN37 437 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 CDC14AQ9UNH5 594 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 ZNF780BQ9Y6R6 833 aa12.92□□□□□ -0.34
CCDC40-209ENST00000573474 BLACEA4D250 179 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 WASHC1A8K0Z3 465 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 MYO1GB0I1T2 1018 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 CYR61O00622 381 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 NME4O00746 187 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 DSCR3O14972 297 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 ZNF749O43361 778 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 DNAJA2O60884 412 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 ERAL1O75616 437 aaKnown RBP12.91□□□□□ -0.34
CCDC40-209ENST00000573474 RNH1P13489 461 aaKnown RBP12.91□□□□□ -0.34
CCDC40-209ENST00000573474 CSNK2A2P19784 350 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-209ENST00000573474 EEFSECP57772 596 aaKnown RBP12.91□□□□□ -0.34
CCDC40-209ENST00000573474 HBA1P69905 142 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 MLC1Q15049 377 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 GTDC1Q4AE62 458 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 RABL3Q5HYI8 236 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 C6orf163Q5TEZ5 329 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 CYB5D1Q6P9G0 228 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 RBM44Q6ZP01 1051 aaKnown RBP12.91□□□□□ -0.34
CCDC40-209ENST00000573474 TTLL10Q6ZVT0 673 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 NET1Q7Z628 596 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-209ENST00000573474 PIP4P1Q86T03 277 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 HPS6Q86YV9 775 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 TRIML2Q8N7C3 387 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 AGBL5Q8NDL9 886 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 OR4K14Q8NGD5 310 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 ZFP28Q8NHY6 868 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 OR6C1Q96RD1 312 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 CSF3RQ99062 836 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 CPPED1Q9BRF8 314 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-209ENST00000573474 THUMPD3Q9BV44 507 aaKnown RBP12.91□□□□□ -0.34
CCDC40-209ENST00000573474 SLAMF7Q9NQ25 335 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 SIDT1Q9NXL6 827 aaKnown RBP12.91□□□□□ -0.34
CCDC40-209ENST00000573474 TAS2R9Q9NYW1 312 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 PACSIN3Q9UKS6 424 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 RARRES3Q9UL19 164 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 SRPK3Q9UPE1 567 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 ERVK-11Q9UQG0 969 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 ENTPD4Q9Y227 616 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 NEUROG3Q9Y4Z2 214 aa12.91□□□□□ -0.34
CCDC40-209ENST00000573474 PRORSD1PA6NEY8 169 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 EVPLLA8MZ36 301 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 TMX2-CTNND1H3BSU7 103 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 GDF9O60383 454 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 RFPL3O75679 317 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 HSD17B1P14061 328 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 ALAS2P22557 587 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 PPIBP23284 216 aaKnown RBP12.9□□□□□ -0.34
CCDC40-209ENST00000573474 CCKBRP32239 447 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 MTPNP58546 118 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 ELF3P78545 371 aaPredicted RBP12.9□□□□□ -0.34
CCDC40-209ENST00000573474 SIM1P81133 766 aaPredicted RBP12.9□□□□□ -0.34
CCDC40-209ENST00000573474 SHC2P98077 582 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 LIPEQ05469 1076 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 COL9A2Q14055 689 aaPredicted RBP12.9□□□□□ -0.34
CCDC40-209ENST00000573474 SELPLGQ14242 412 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 CEBPEQ15744 281 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 STPG1Q5TH74 334 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 FAM180BQ6P0A1 224 aa12.9□□□□□ -0.34
CCDC40-209ENST00000573474 B3GNT8Q7Z7M8 397 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms