RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 RNF224P0DH78 156 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 PCNAP12004 261 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 JAK1P23458 1154 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 ATP5F1P24539 256 aaPredicted RBP8.11□□□□□ -1.11
SMG6-210ENST00000572205 CRHR1P34998 444 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 TNFSF10P50591 281 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 TDGF1P3P51864 188 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 HSD17B7P56937 341 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 TNFRSF17Q02223 184 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 CLCQ05315 142 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 ZNF844Q08AG5 666 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 DDX39BQ13838 428 aaKnown RBP8.11□□□□□ -1.11
SMG6-210ENST00000572205 NSDHLQ15738 373 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 TMEM35AQ53FP2 167 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 FRG2Q64ET8 278 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 C18orf63Q68DL7 685 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 FCRLBQ6BAA4 426 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 EMBQ6PCB8 327 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 ISLR2Q6UXK2 745 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 ZYG11AQ6WRX3 759 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 FRMD7Q6ZUT3 714 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 CRLF3Q8IUI8 442 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 C4orf33Q8N1A6 199 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 ZNF321PQ8N8H1 164 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 BANPQ8N9N5 519 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 MDS2Q8NDY4 140 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 CATSPER1Q8NEC5 780 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 M1APQ8TC57 530 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 PTPMT1Q8WUK0 201 aaPredicted RBP8.11□□□□□ -1.11
SMG6-210ENST00000572205 CCT6BQ92526 530 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 SNRNP40Q96DI7 357 aaKnown RBP8.11□□□□□ -1.11
SMG6-210ENST00000572205 CMTM7Q96FZ5 175 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 FRMD6Q96NE9 622 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 FRG2BQ96QU4 278 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 TAAR6Q96RI8 345 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 KCNA7Q96RP8 456 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 HBEGFQ99075 208 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 TBCDQ9BTW9 1192 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 TMEM109Q9BVC6 243 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 YIPF2Q9BWQ6 316 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 ACTR8Q9H981 624 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 PPCSQ9HAB8 311 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 PTGFRNQ9P2B2 879 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 TRPS1Q9UHF7 1281 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 FOXD3Q9UJU5 478 aaPredicted RBP8.11□□□□□ -1.11
SMG6-210ENST00000572205 ATG4BQ9Y4P1 393 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 IKBKGQ9Y6K9 419 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 FBN2P35556 2912 aa8.11□□□□□ -1.11
SMG6-210ENST00000572205 A0A1W2PR48 441 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 HRKO00198 91 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 B3GALT2O43825 422 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 TYROBPO43914 113 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 LDB3O75112 727 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 SMIM24O75264 130 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 H2AFYO75367 372 aaKnown RBP8.1□□□□□ -1.11
SMG6-210ENST00000572205 NEURL1O76050 574 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 OR4F21O95013 312 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 AIFM1O95831 613 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 WDPCPO95876 746 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 PDYNP01213 254 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 IGKV3-11P04433 115 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 CHN1P15882 459 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 IMPDH1P20839 514 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 ETV4P43268 484 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 ST13P50502 369 aaKnown RBP8.1□□□□□ -1.11
SMG6-210ENST00000572205 SKP1P63208 163 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 RAE1P78406 368 aaKnown RBP8.1□□□□□ -1.11
SMG6-210ENST00000572205 DUSP2Q05923 314 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 INPP5JQ15735 1006 aaPredicted RBP8.1□□□□□ -1.11
SMG6-210ENST00000572205 BTBD16Q32M84 506 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 AGAP7PQ5VUJ5 663 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 OR4C11Q6IEV9 310 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 LINC00696Q6ZRV3 163 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 CLNKQ7Z7G1 428 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 ZNF595Q8IYB9 648 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 MMP21Q8N119 569 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 LGI4Q8N135 537 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 BEST3Q8N1M1 668 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 METTL4Q8N3J2 472 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 TEX19Q8NA77 164 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 MYRIPQ8NFW9 859 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 ADAMTS18Q8TE60 1221 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 HAS2Q92819 552 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 UBE2E3Q969T4 207 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 APOPT1Q96IL0 206 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 SCYL1Q96KG9 808 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 PTCHD1Q96NR3 888 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 AGAP4Q96P64 663 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 SIGLEC12Q96PQ1 595 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 LMF1Q96S06 567 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 SLX1AQ9BQ83 275 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 MRPL1Q9BYD6 325 aaKnown RBP8.1□□□□□ -1.11
SMG6-210ENST00000572205 HES7Q9BYE0 225 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 PARD6BQ9BYG5 372 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 ACPTQ9BZG2 426 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 C12orf49Q9H741 205 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 TRIM45Q9H8W5 580 aaPredicted RBP8.1□□□□□ -1.11
SMG6-210ENST00000572205 PLA2G3Q9NZ20 509 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 C19orf25Q9UFG5 118 aaPredicted RBP8.1□□□□□ -1.11
SMG6-210ENST00000572205 ADGRE2Q9UHX3 823 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms