RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 TRPT1Q86TN4 253 aaKnown RBP2.66□□□□□ -1.98
RPA1-204ENST00000571725 KIRREL3Q8IZU9 778 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 FBXL16Q8N461 479 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 RAB42Q8N4Z0 105 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 CCDC185Q8N715 623 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 TMEM99Q8N816 258 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 GBP7Q8N8V2 638 aaPredicted RBP2.66□□□□□ -1.98
RPA1-204ENST00000571725 RNF149Q8NC42 400 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 SLC37A3Q8NCC5 494 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 GMCL1P1Q8NEA9 526 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 KLHDC9Q8NEP7 349 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 OR4D10Q8NGI6 311 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 OR10V1Q8NGI7 309 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 ACER1Q8TDN7 264 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 CHURC1Q8WUH1 139 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 DYRK2Q92630 601 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 ULK4Q96C45 1275 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 NAP1L3Q99457 506 aaPredicted RBP2.66□□□□□ -1.98
RPA1-204ENST00000571725 FAM213AQ9BRX8 229 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 UBAC1Q9BSL1 405 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 CACNG6Q9BXT2 260 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 MMP28Q9H239 520 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 THAP9Q9H5L6 903 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 VCPKMTQ9H867 229 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 PELI2Q9HAT8 420 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 TBC1D13Q9NVG8 400 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 INTS10Q9NVR2 710 aaKnown RBP2.66□□□□□ -1.98
RPA1-204ENST00000571725 DONSONQ9NYP3 566 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 KCNG2Q9UJ96 466 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 HOOK1Q9UJC3 728 aaKnown RBP2.66□□□□□ -1.98
RPA1-204ENST00000571725 ELF5Q9UKW6 265 aaPredicted RBP2.66□□□□□ -1.98
RPA1-204ENST00000571725 C2CD2Q9Y426 696 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 RIPK3Q9Y572 518 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 ZHX2Q9Y6X8 837 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 COLEC10Q9Y6Z7 277 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 PFASO15067 1338 aa2.66□□□□□ -1.98
RPA1-204ENST00000571725 PARP14Q460N5 1801 aa2.65□□□□□ -1.98
RPA1-204ENST00000571725 NKX6-3A6NJ46 265 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 F5H6K3 240 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 BMPR1BO00238 502 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 PDHXO00330 501 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 KINO60870 393 aaKnown RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 GLCEO94923 617 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 NDUFB10O96000 172 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 PAK4O96013 591 aaPredicted RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 TSHBP01222 138 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 MT-ND3P03897 115 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 RAF1P04049 648 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 HMBSP08397 361 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 SBK2P0C263 348 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 ANKRD34CP0C6C1 535 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 PDHBP11177 359 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 TOP1P11387 765 aaKnown RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 DARSP14868 501 aaKnown RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 ZNF18P17022 549 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 AADACP22760 399 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 DCTP40126 519 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 NR0B1P51843 470 aaKnown RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 HMGCS2P54868 508 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 NME5P56597 212 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 IRX3P78415 501 aaPredicted RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 KLRC3Q07444 240 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 ACTN3Q08043 901 aaPredicted RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 ILF3Q12906 894 aaKnown RBP eCLIP2.65□□□□□ -1.99
RPA1-204ENST00000571725 SMC1AQ14683 1233 aaKnown RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 SHROOM1Q2M3G4 852 aaPredicted RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 TTC31Q49AM3 519 aaPredicted RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 GTDC1Q4AE62 458 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 XKR6Q5GH73 641 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 KCTD11Q693B1 232 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 UGT3A1Q6NUS8 523 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 ALKBH5Q6P6C2 394 aaKnown RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 BLOC1S2Q6QNY1 142 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 SH2D5Q6ZV89 423 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 SLC24A5Q71RS6 500 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 MARK2Q7KZI7 788 aaKnown RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 SLC16A9Q7RTY1 509 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 MIER3Q7Z3K6 550 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 DCUN1D3Q8IWE4 304 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 RTL3Q8N8U3 475 aaKnown RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 OR5T2Q8NGG2 359 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 GANCQ8TET4 914 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 PIK3R3Q92569 461 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 SNX21Q969T3 373 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 C5orf30Q96GV9 206 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 PDLIM5Q96HC4 596 aaKnown RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 INPP4AQ96PE3 977 aaPredicted RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 PANX3Q96QZ0 392 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 CTAGE1Q96RT6 745 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 ATP6V0BQ99437 205 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 PKP4Q99569 1192 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 IL12RB2Q99665 862 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 ALKBH7Q9BT30 221 aaPredicted RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 LRRC2Q9BYS8 371 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 DPEP2Q9H4A9 486 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 VIPAS39Q9H9C1 493 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 ZNF556Q9HAH1 456 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 MAGEF1Q9HAY2 307 aa2.65□□□□□ -1.99
RPA1-204ENST00000571725 ZNF624Q9P2J8 865 aaPredicted RBP2.65□□□□□ -1.99
RPA1-204ENST00000571725 CLIP2Q9UDT6 1046 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms