RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 NXPE2Q96DL1 559 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 CMTM5Q96DZ9 223 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 MTERF3Q96E29 417 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 RNF31Q96EP0 1072 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 OR1F2PQ96R84 312 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 MAPKAP1Q9BPZ7 522 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 SLC25A23Q9BV35 468 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF717Q9BY31 904 aaPredicted RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 MYLK2Q9H1R3 596 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 REEP4Q9H6H4 257 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 RUBCNLQ9H714 662 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 RMND5AQ9H871 391 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 POLR1BQ9H9Y6 1135 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 MKKSQ9NPJ1 570 aaPredicted RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 LHX9Q9NQ69 397 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 PRDM7Q9NQW5 492 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 SAR1AQ9NR31 198 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 SDR39U1Q9NRG7 319 aaPredicted RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 ENAMQ9NRM1 1142 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 TMEM45AQ9NWC5 275 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 TEX10Q9NXF1 929 aaPredicted RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 EHD3Q9NZN3 535 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 CCDC167Q9P0B6 97 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 SH3BP4Q9P0V3 963 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 IFT80Q9P2H3 777 aaPredicted RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF282Q9UDV7 671 aaPredicted RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 BAIAP2L1Q9UHR4 511 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 NXT1Q9UKK6 140 aaKnown RBP6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 PSME2Q9UL46 239 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 DAPP1Q9UN19 280 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 PADI2Q9Y2J8 665 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 GPR45Q9Y5Y3 372 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 B3GALT1Q9Y5Z6 326 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 ZNF780BQ9Y6R6 833 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 WDFY4Q6ZS81 3184 aa6.22□□□□□ -1.41
CTDNEP1-204ENST00000570484 USP34Q70CQ2 3546 aa6.21□□□□□ -1.41
CTDNEP1-204ENST00000570484 C9JVG2 144 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 H3BMH7 237 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 STMND1H3BQB6 276 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 TERTO14746 1132 aaKnown RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 NVLO15381 856 aaKnown RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 CHST10O43529 356 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 FOXS1O43638 330 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 DYRK3O43781 588 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 ERAL1O75616 437 aaKnown RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 CDC123O75794 336 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 TIAF1O95411 115 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 IL6P05231 212 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 FAM157BP0CG42 384 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 ITGAXP20702 1163 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 IL10P22301 178 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 TACR1P25103 407 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 CD82P27701 267 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 PIK3R1P27986 724 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 SOAT1P35610 550 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 ETV5P41161 510 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR1D4P47884 311 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 MRPL19P49406 292 aaKnown RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 MNAT1P51948 309 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 CLDN8P56748 225 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 UFM1P61960 85 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 PLIN5Q00G26 463 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 SRSF11Q05519 484 aaKnown RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 LRRC74AQ0VAA2 488 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 STX4Q12846 297 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 KLF10Q13118 480 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC13A2Q13183 592 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 CYLC2Q14093 348 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 RCAN2Q14206 197 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 PUM1Q14671 1186 aaKnown RBP eCLIP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 NKAIN1Q4KMZ8 207 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 ARSJQ5FYB0 599 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 SPANXN4Q5MJ08 99 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 C6orf10Q5SRN2 563 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 CPTPQ5TA50 214 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 ANXA8L1Q5VT79 327 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 FAM71E1Q6IPT2 247 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 FIGNL1Q6PIW4 674 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 C6orf15Q6UXA7 325 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 CCDC121Q6ZUS5 278 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 TMPRSS7Q7RTY8 843 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 SZRD1Q7Z422 152 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 SNX32Q86XE0 403 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 TICAM1Q8IUC6 712 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF595Q8IYB9 648 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 ARHGEF39Q8N4T4 335 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 CPSF7Q8N684 471 aaKnown RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 ESX1Q8N693 406 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 KRTCAP2Q8N6L1 136 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 NATD1Q8N6N6 113 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 AMER3Q8N944 861 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 GALNT6Q8NCL4 622 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 C7orf57Q8NEG2 295 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR5T3Q8NGG3 340 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR9I1Q8NGQ6 314 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR51Q1Q8NH59 317 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 KIAA1143Q96AT1 154 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 FKBP10Q96AY3 582 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 TESCQ96BS2 214 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 TBC1D20Q96BZ9 403 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms