RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 OXNAD1Q96HP4 312 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 WWC2-AS2Q96NR7 200 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 EBNA1BP2Q99848 306 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 AGPAT1Q99943 283 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 TACO1Q9BSH4 297 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 PIMREGQ9BSJ6 248 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 DOHHQ9BU89 302 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 RSPO3Q9BXY4 272 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 FAM129AQ9BZQ8 928 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 GANQ9H2C0 597 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 CLK4Q9HAZ1 481 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 ARNT2Q9HBZ2 717 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 PNO1Q9NRX1 252 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 CBLN4Q9NTU7 201 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 DNAJC11Q9NVH1 559 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 WHRNQ9P202 907 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 TAC3Q9UHF0 121 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 KLHL21Q9UJP4 597 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 TRHDEQ9UKU6 1024 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 CNOT11Q9UKZ1 510 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 RNF112Q9ULX5 631 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 DLGAP4Q9Y2H0 992 aa5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 CHCHD2Q9Y6H1 151 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-217ENST00000569429 BIN1O00499 593 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 SCAMP2O15127 329 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 APOA4P06727 396 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 PNLIPRP1P54315 467 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 UBA52P62987 128 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 SKP1P63208 163 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 OLR1P78380 273 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 IL13RA1P78552 427 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 PKP1Q13835 747 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 PIGHQ14442 188 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 ARHGAP19Q14CB8 494 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 PDK2Q15119 407 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 PHKG1Q16816 387 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 FNDC7Q5VTL7 733 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 SBSNQ6UWP8 590 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 ADCK2Q7Z695 626 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 CILP2Q8IUL8 1156 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 HSCBQ8IWL3 235 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 FMR1NBQ8N0W7 255 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 TMEM132CQ8N3T6 1108 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 SLC15A4Q8N697 577 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 HTRA1Q92743 480 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 HPS1Q92902 700 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 SPACA9Q96E40 222 aaPredicted RBP5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 FCRL5Q96RD9 977 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 SUCNR1Q9BXA5 334 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 FSD1LQ9BXM9 530 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 ACTR6Q9GZN1 396 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 RASSF4Q9H2L5 321 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 NGBQ9NPG2 151 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 ESM1Q9NQ30 184 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 PTBP2Q9UKA9 531 aaKnown RBP5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 PROCRQ9UNN8 238 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 USP22Q9UPT9 525 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 C15orf41Q9Y2V0 281 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 CLDN16Q9Y5I7 305 aa5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
HERPUD1-217ENST00000569429 SYNDIG1LA6NDD5 238 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 H7BY64 318 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 PLOD2O00469 737 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 CCL22O00626 93 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 SNX4O95219 450 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 NFKB1P19838 968 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 TPSB2P20231 275 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 PTNP21246 168 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 EPHA1P21709 976 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 HRH2P25021 359 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 PPP2R1BP30154 601 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 TTKP33981 857 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 GCKP35557 465 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 CDH15P55291 814 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 SIRPAP78324 504 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 SRYQ05066 204 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 ZNF844Q08AG5 666 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 BMPR2Q13873 1038 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 NFKBIBQ15653 356 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 TPSAB1Q15661 275 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 CYP1B1Q16678 543 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 BEAN1Q3B7T3 259 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 IQCCQ4KMZ1 466 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 KPRPQ5T749 579 aaPredicted RBP5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 UGT2A3Q6UWM9 527 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 RANBP10Q6VN20 620 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 MICALCLQ6ZW33 695 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 P4HA3Q7Z4N8 544 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 ASPGQ86U10 573 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 SVOPLQ8N434 492 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 PLD5Q8N7P1 536 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 NIPA2Q8N8Q9 360 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 MORN4Q8NDC4 146 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 ZNF540Q8NDQ6 660 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 FAM83FQ8NEG4 500 aaPredicted RBP5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 OR9A1PQ8NGU1 263 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 NUBPLQ8TB37 319 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 SLC13A3Q8WWT9 602 aa5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 DAZLQ92904 295 aaKnown RBP5.92□□□□□ -1.46
HERPUD1-217ENST00000569429 DNAJC1Q96KC8 554 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms