RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 IGHG3P01860 377 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 CD1EP15812 388 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 CNR1P21554 472 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 GSTM2P28161 218 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 DLX5P56178 289 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 DR1Q01658 176 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 FOXO1Q12778 655 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 NDUFAF5Q5TEU4 345 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 B3GNT6Q6ZMB0 384 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 RGS9BPQ6ZS82 235 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 OR4N5Q8IXE1 308 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 PTCD3Q96EY7 689 aaKnown RBP14.35□□□□□ -0.11
NME3-211ENST00000568561 MCMBPQ9BTE3 642 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 DERL2Q9GZP9 239 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 IL1RL2Q9HB29 575 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 SACM1LQ9NTJ5 587 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 MOCS1Q9NZB8 636 aa14.35□□□□□ -0.11
NME3-211ENST00000568561 OR14I1A6ND48 311 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 HRKO00198 91 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 SAP18O00422 153 aaKnown RBP14.34□□□□□ -0.11
NME3-211ENST00000568561 BCKDKO14874 412 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 FGF17O60258 216 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 SEC31AO94979 1220 aaKnown RBP14.34□□□□□ -0.11
NME3-211ENST00000568561 LRATO95237 230 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 P04436 131 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 CCDC166P0CW27 439 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 EPORP19235 508 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 ENDOUP21128 410 aaKnown RBP14.34□□□□□ -0.11
NME3-211ENST00000568561 ATP5A1P25705 553 aaKnown RBP14.34□□□□□ -0.11
NME3-211ENST00000568561 MSH2P43246 934 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 KCNC1P48547 511 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 MAN2A2P49641 1150 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 SLC12A2P55011 1212 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 ASPHQ12797 758 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 RCN2Q14257 317 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 EFTUD2Q15029 972 aaKnown RBP eCLIP14.34□□□□□ -0.116e-11■■■■■ 37.4
NME3-211ENST00000568561 PDK4Q16654 411 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 PRAMEF20Q5VT98 475 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 CES4AQ5XG92 561 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 DGAT2L6Q6ZPD8 337 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 GPSM1Q86YR5 675 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 ZZZ3Q8IYH5 903 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 ZNF721Q8TF20 911 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 ANKRD9Q96BM1 317 aaPredicted RBP14.34□□□□□ -0.11
NME3-211ENST00000568561 KCNC2Q96PR1 638 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 SORBS1Q9BX66 1292 aaKnown RBP14.34□□□□□ -0.11
NME3-211ENST00000568561 EHD1Q9H4M9 534 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 EXO5Q9H790 373 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 CNOT10Q9H9A5 744 aaKnown RBP14.34□□□□□ -0.11
NME3-211ENST00000568561 POPDC3Q9HBV1 291 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 TRMT1Q9NXH9 659 aaKnown RBP14.34□□□□□ -0.11
NME3-211ENST00000568561 ALKBH4Q9NXW9 302 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 CD274Q9NZQ7 290 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 SPRR3Q9UBC9 169 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 ACAD8Q9UKU7 415 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 L3MBTL1Q9Y468 752 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 ATG4BQ9Y4P1 393 aa14.34□□□□□ -0.11
NME3-211ENST00000568561 CXorf49A8MYA2 514 aaPredicted RBP14.33□□□□□ -0.12
NME3-211ENST00000568561 AQP7O14520 342 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 CCNT2O60583 730 aaKnown RBP14.33□□□□□ -0.12
NME3-211ENST00000568561 PRKRAO75569 313 aaKnown RBP14.33□□□□□ -0.12
NME3-211ENST00000568561 STK16O75716 305 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 PCNAP12004 261 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 CD1DP15813 335 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 HPDP32754 393 aaPredicted RBP14.33□□□□□ -0.12
NME3-211ENST00000568561 GGT5P36269 586 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 ZFP36L2P47974 494 aaKnown RBP14.33□□□□□ -0.12
NME3-211ENST00000568561 IST1P53990 364 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 MRPS25P82663 173 aaKnown RBP14.33□□□□□ -0.12
NME3-211ENST00000568561 TGM3Q08188 693 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 CHIT1Q13231 466 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 C1orf185Q5T7R7 199 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 ADGRD1Q6QNK2 874 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 OPN5Q6U736 354 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 WDR53Q7Z5U6 358 aaPredicted RBP14.33□□□□□ -0.12
NME3-211ENST00000568561 C9orf40Q8IXQ3 194 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 ZBED8Q8IZ13 594 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 CLYBLQ8N0X4 340 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 TCAIMQ8N3R3 496 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 RNF175Q8N4F7 328 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 ACOT4Q8N9L9 421 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 GOLM1Q8NBJ4 401 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 OR8K3Q8NH51 312 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 ZNF473Q8WTR7 871 aaKnown RBP14.33□□□□□ -0.12
NME3-211ENST00000568561 KIAA1191Q96A73 305 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 PPWD1Q96BP3 646 aaKnown RBP14.33□□□□□ -0.12
NME3-211ENST00000568561 WDR34Q96EX3 536 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 EFCAB11Q9BUY7 163 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 CAPS2Q9BXY5 557 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 MS4A8Q9BY19 250 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 PITHD1Q9GZP4 211 aaPredicted RBP14.33□□□□□ -0.12
NME3-211ENST00000568561 LIME1Q9H400 295 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 LDAHQ9H6V9 325 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 LYRM4Q9HD34 91 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 COPS7AQ9UBW8 275 aa14.33□□□□□ -0.12
NME3-211ENST00000568561 A0A1B0GVC2 190 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 RFPL3SP0C7P2 107 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 CPN2P22792 545 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 SSR2P43308 183 aa14.32□□□□□ -0.12
NME3-211ENST00000568561 KCNJ2P63252 427 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms