RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 RMI1Q9H9A7 625 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 CPNE5Q9HCH3 593 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 P2RX2Q9UBL9 471 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 NDOR1Q9UHB4 597 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 TAC3Q9UHF0 121 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 ITGB1BP2Q9UKP3 347 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.87□□□□□ -0.99
BBS4-210ENST00000566400 CFL2Q9Y281 166 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 TDRKHQ9Y2W6 561 aaKnown RBP8.87□□□□□ -0.99
BBS4-210ENST00000566400 PRAMEF33A0A0G2JMD5 474 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 IRGMA1A4Y4 181 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 PRRT4C9JH25 899 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 K7ESM1 405 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 PRAMEF10O60809 474 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 MED26O95402 600 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 GBAP04062 536 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 FSHRP23945 695 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 BSGP35613 385 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 EIF2DP41214 584 aaKnown RBP8.87□□□□□ -0.99
BBS4-210ENST00000566400 TSFMP43897 325 aaKnown RBP8.87□□□□□ -0.99
BBS4-210ENST00000566400 PCBP4P57723 403 aaKnown RBP8.87□□□□□ -0.99
BBS4-210ENST00000566400 NCS1P62166 190 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 NTHL1P78549 312 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 PRKCDQ05655 676 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 FPGSQ05932 587 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 ST3GAL4Q11206 333 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 ILKQ13418 452 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 IRF3Q14653 427 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 RNLSQ5VYX0 342 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 PPP2R2DQ66LE6 453 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 PTCHD4Q6ZW05 846 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 C12orf40Q86WS4 652 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 MFSD4AQ8N468 514 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 GALNT6Q8NCL4 622 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 SRFBP1Q8NEF9 429 aaKnown RBP8.87□□□□□ -0.99
BBS4-210ENST00000566400 OR5AR1Q8NGP9 310 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 OR5AK3PQ8NH89 298 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 RNF217Q8TC41 542 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 ING5Q8WYH8 240 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 SMG7Q92540 1137 aaKnown RBP8.87□□□□□ -0.99
BBS4-210ENST00000566400 SMARCD2Q92925 531 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 TM4SF18Q96CE8 201 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 DHRS1Q96LJ7 313 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 SAMD11Q96NU1 681 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 MYOCQ99972 504 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 UCK2Q9BZX2 261 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 NXF2Q9GZY0 626 aaKnown RBP8.87□□□□□ -0.99
BBS4-210ENST00000566400 PRO3102Q9H379 93 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 CXorf36Q9H7Y0 433 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 DDX31Q9H8H2 851 aaKnown RBP8.87□□□□□ -0.99
BBS4-210ENST00000566400 SEMA3GQ9NS98 782 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 ZNF226Q9NYT6 803 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 LMCD1Q9NZU5 365 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 MKLN1Q9UL63 735 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 PAIP2BQ9ULR5 123 aaKnown RBP8.87□□□□□ -0.99
BBS4-210ENST00000566400 SH2B3Q9UQQ2 575 aa8.87□□□□□ -0.99
BBS4-210ENST00000566400 METTL15A6NJ78 407 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 SNTNA6NMZ2 147 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 CCRL2O00421 344 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 NDUFS4O43181 175 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 MAN1A2O60476 641 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 KLHL18O94889 574 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 SLITRK5O94991 958 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 MFN2O95140 757 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 BCHEP06276 602 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 H1F0P07305 194 aaKnown RBP8.86□□□□□ -0.99
BBS4-210ENST00000566400 ADORA3P0DMS8 318 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 NTSP30990 170 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 LIPAP38571 399 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 P2RY2P41231 377 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 RGS6P49758 472 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 COPZ1P61923 177 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 LSM3P62310 102 aaKnown RBP8.86□□□□□ -0.99
BBS4-210ENST00000566400 ABATP80404 500 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 CDK3Q00526 305 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 MEF2AQ02078 507 aaPredicted RBP8.86□□□□□ -0.99
BBS4-210ENST00000566400 RHAGQ02094 409 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 ALDH6A1Q02252 535 aaKnown RBP8.86□□□□□ -0.99
BBS4-210ENST00000566400 NCF4Q15080 339 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 ARMCX4Q5H9R4 360 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 PRAMEF8Q5VWM4 474 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 PRAMEF7Q5VXH5 474 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 KIAA1211LQ6NV74 962 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 CASP12Q6UXS9 341 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 TMEM64Q6YI46 380 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 PLEKHG7Q6ZR37 379 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 C6orf120Q7Z4R8 191 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 VN1R5Q7Z5H4 357 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 HEATR4Q86WZ0 1026 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 ZBTB8BQ8NAP8 495 aaPredicted RBP8.86□□□□□ -0.99
BBS4-210ENST00000566400 BBS10Q8TAM1 723 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 SLC38A5Q8WUX1 472 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 NXPE3Q969Y0 559 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 ZNF707Q96C28 371 aaPredicted RBP8.86□□□□□ -0.99
BBS4-210ENST00000566400 BTBD2Q9BX70 525 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 SPNS1Q9H2V7 528 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 TRIM45Q9H8W5 580 aaPredicted RBP8.86□□□□□ -0.99
BBS4-210ENST00000566400 NMNAT1Q9HAN9 279 aaPredicted RBP8.86□□□□□ -0.99
BBS4-210ENST00000566400 MS4A12Q9NXJ0 267 aa8.86□□□□□ -0.99
BBS4-210ENST00000566400 SELENONQ9NZV5 590 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms