RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 CDKN2CP42773 168 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 GCGRP47871 477 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 ARSFP54793 590 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 RAB38P57729 211 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 SHC2P98077 582 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 OR52E8Q6IFG1 317 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 NANOGP8Q6NSW7 305 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 FAM180BQ6P0A1 224 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 AGBL5Q8NDL9 886 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 OR4A15Q8NGL6 344 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 MVB12AQ96EY5 273 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 GBP5Q96PP8 586 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 RPF2Q9H7B2 306 aaKnown RBP17.7■□□□□ 0.42
COMMD4-213ENST00000565834 NANOGQ9H9S0 305 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 SLC35C2Q9NQQ7 365 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 PRDM9Q9NQV7 894 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 VAPAQ9P0L0 249 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 HCN3Q9P1Z3 774 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 NDOR1Q9UHB4 597 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 CES1P1Q9UKY3 287 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 RARRES3Q9UL19 164 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 PSME2Q9UL46 239 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 PCDHB14Q9Y5E9 798 aa17.7■□□□□ 0.42
COMMD4-213ENST00000565834 PCNX2A6NKB5 2137 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 SEC16AO15027 2179 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 H0YIG0 161 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 NVLO15381 856 aaKnown RBP17.69■□□□□ 0.42
COMMD4-213ENST00000565834 ZNF749O43361 778 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 ERAL1O75616 437 aaKnown RBP17.69■□□□□ 0.42
COMMD4-213ENST00000565834 PDE5AO76074 875 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 C6orf47O95873 294 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 GSNP06396 782 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 PTPN6P29350 595 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 NTSP30990 170 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 PDX1P52945 283 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 C16orf72Q14CZ0 275 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 GTDC1Q4AE62 458 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 PRAMEF17Q5VTA0 474 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 PIP4P1Q86T03 277 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 METTL27Q8N6F8 245 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-213ENST00000565834 ZBED6CLQ96FA7 236 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-213ENST00000565834 ANKRD27Q96NW4 1050 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 SLC6A13Q9NSD5 602 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 GIMAP4Q9NUV9 329 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 SLC25A37Q9NYZ2 338 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 TMEM181Q9P2C4 612 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 ABCD2Q9UBJ2 740 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 SRPK3Q9UPE1 567 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 ENTPD4Q9Y227 616 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 L3MBTL1Q9Y468 752 aa17.69■□□□□ 0.42
COMMD4-213ENST00000565834 TRBV5-3A0A0A0MS03 114 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 WASHC1A8K0Z3 465 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 ABCB1P08183 1280 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-213ENST00000565834 RNH1P13489 461 aaKnown RBP17.68■□□□□ 0.42
COMMD4-213ENST00000565834 HOXB9P17482 250 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-213ENST00000565834 ALAS2P22557 587 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 FRKP42685 505 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-213ENST00000565834 PCBP4P57723 403 aaKnown RBP17.68■□□□□ 0.42
COMMD4-213ENST00000565834 SIM1P81133 766 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-213ENST00000565834 PIGGQ5H8A4 983 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 CYB5D1Q6P9G0 228 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 PGM2L1Q6PCE3 622 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 ZNF621Q6ZSS3 439 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 MSRB3Q8IXL7 192 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 SLC15A3Q8IY34 581 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 FBXW8Q8N3Y1 598 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 OR8J3Q8NGG0 315 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 ADAMTS18Q8TE60 1221 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 TMEM125Q96AQ2 219 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 BBS4Q96RK4 519 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 TRIM8Q9BZR9 551 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 SLAMF7Q9NQ25 335 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 ACSS1Q9NUB1 689 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-213ENST00000565834 OCIAD1Q9NX40 245 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 DHCR7Q9UBM7 475 aaKnown RBP17.68■□□□□ 0.42
COMMD4-213ENST00000565834 PACSIN3Q9UKS6 424 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 VPS4AQ9UN37 437 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 CDC14AQ9UNH5 594 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 NEUROG3Q9Y4Z2 214 aa17.68■□□□□ 0.42
COMMD4-213ENST00000565834 EFCAB7A8K855 629 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 PROB1E7EW31 1015 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 H0YHG0 523 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 CYR61O00622 381 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 NME4O00746 187 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 DSCR3O14972 297 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 HYAL3O43820 417 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 CCKBRP32239 447 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 MANFP55145 182 aaKnown RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 HBA1P69905 142 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 CEACAM7Q14002 265 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 RABL3Q5HYI8 236 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 SAMD4BQ5PRF9 694 aaKnown RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 RNF148Q8N7C7 305 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 GOT1L1Q8NHS2 421 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-213ENST00000565834 ZFP28Q8NHY6 868 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 OR5P2Q8WZ92 322 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 SH3GL1Q99961 368 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 SLC7A5P2Q9GIP4 190 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 CMTM6Q9NX76 183 aa17.67■□□□□ 0.42
COMMD4-213ENST00000565834 TAS2R9Q9NYW1 312 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms